Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.64□□□□□ -0.23
KRT6AP02538 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
KRT6AP02538 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.64□□□□□ -0.23
KRT6AP02538 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.63□□□□□ -0.23
KRT6AP02538 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.63□□□□□ -0.23
KRT6AP02538 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
KRT6AP02538 AC004899.2-201ENST00000622993 3860 ntBASIC13.63□□□□□ -0.23
KRT6AP02538 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.63□□□□□ -0.23
KRT6AP02538 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 AL358781.1-202ENST00000321081 1360 ntBASIC13.63□□□□□ -0.23
KRT6AP02538 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
KRT6AP02538 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.63□□□□□ -0.23
KRT6AP02538 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
KRT6AP02538 SNORA50C-201ENST00000408535 133 ntBASIC13.63□□□□□ -0.23
KRT6AP02538 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.63□□□□□ -0.23
KRT6AP02538 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.63□□□□□ -0.23
KRT6AP02538 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
KRT6AP02538 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.63□□□□□ -0.23
KRT6AP02538 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.63□□□□□ -0.23
KRT6AP02538 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.63□□□□□ -0.23
KRT6AP02538 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.63□□□□□ -0.23
KRT6AP02538 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.63□□□□□ -0.23
KRT6AP02538 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.63□□□□□ -0.23
KRT6AP02538 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.63□□□□□ -0.23
KRT6AP02538 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.63□□□□□ -0.23
KRT6AP02538 AC022748.3-201ENST00000621828 275 ntBASIC13.63□□□□□ -0.23
KRT6AP02538 SNORA50.1-201ENST00000628590 135 ntBASIC13.63□□□□□ -0.23
KRT6AP02538 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
KRT6AP02538 AC068587.8-201ENST00000641239 219 ntBASIC13.63□□□□□ -0.23
KRT6AP02538 AL805961.2-201ENST00000642139 4817 ntBASIC13.63□□□□□ -0.23
KRT6AP02538 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 LINC01165-201ENST00000445190 1623 ntBASIC13.63□□□□□ -0.23
KRT6AP02538 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
KRT6AP02538 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
KRT6AP02538 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.63□□□□□ -0.23
KRT6AP02538 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRT6AP02538 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
KRT6AP02538 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 AC008620.2-201ENST00000510294 1569 ntBASIC13.62□□□□□ -0.23
KRT6AP02538 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.62□□□□□ -0.23
KRT6AP02538 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.62□□□□□ -0.23
KRT6AP02538 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.62□□□□□ -0.23
KRT6AP02538 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
KRT6AP02538 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
KRT6AP02538 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.62□□□□□ -0.23
KRT6AP02538 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
KRT6AP02538 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
KRT6AP02538 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.62□□□□□ -0.23
KRT6AP02538 MIR658-201ENST00000385210 100 ntBASIC13.62□□□□□ -0.23
KRT6AP02538 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
KRT6AP02538 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 TSPY25P-201ENST00000429463 745 ntBASIC13.62□□□□□ -0.23
KRT6AP02538 RPL13AP20-201ENST00000459725 609 ntBASIC13.62□□□□□ -0.23
KRT6AP02538 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.62□□□□□ -0.23
KRT6AP02538 FAM86HP-204ENST00000513466 959 ntBASIC13.62□□□□□ -0.23
KRT6AP02538 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
KRT6AP02538 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
KRT6AP02538 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.62□□□□□ -0.23
KRT6AP02538 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.62□□□□□ -0.23
KRT6AP02538 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.62□□□□□ -0.23
KRT6AP02538 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
KRT6AP02538 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms