Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 HIST2H2BC-201ENST00000498492 580 ntBASIC12.33□□□□□ -0.44
NPIPB4C9JG80 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 AC242376.1-201ENST00000559033 726 ntBASIC12.33□□□□□ -0.44
NPIPB4C9JG80 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.33□□□□□ -0.44
NPIPB4C9JG80 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 DGCR9-201ENST00000609630 2415 ntBASIC12.32□□□□□ -0.44
NPIPB4C9JG80 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.32□□□□□ -0.44
NPIPB4C9JG80 CALR4P-201ENST00000431943 946 ntBASIC12.32□□□□□ -0.44
NPIPB4C9JG80 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 AC092573.1-201ENST00000433054 884 ntBASIC12.32□□□□□ -0.44
NPIPB4C9JG80 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 RN7SL11P-201ENST00000471305 293 ntBASIC12.32□□□□□ -0.44
NPIPB4C9JG80 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.32□□□□□ -0.44
NPIPB4C9JG80 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.32□□□□□ -0.44
NPIPB4C9JG80 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 C8orf49-201ENST00000525043 1968 ntBASIC12.32□□□□□ -0.44
NPIPB4C9JG80 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
NPIPB4C9JG80 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms