Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 OR8T1P-201ENST00000421347 918 ntBASIC14.02□□□□□ -0.17
SPASTQ9UBP0 AL512306.1-201ENST00000432698 848 ntBASIC14.02□□□□□ -0.17
SPASTQ9UBP0 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.02□□□□□ -0.17
SPASTQ9UBP0 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 SIGLEC22P-201ENST00000599104 714 ntBASIC14.01□□□□□ -0.17
SPASTQ9UBP0 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 AP000322.3-201ENST00000608665 388 ntBASIC14.01□□□□□ -0.17
SPASTQ9UBP0 AC084781.1-201ENST00000613737 656 ntBASIC14.01□□□□□ -0.17
SPASTQ9UBP0 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 AC011474.4-201ENST00000623523 2076 ntBASIC14.01□□□□□ -0.17
SPASTQ9UBP0 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 PCDHA5-203ENST00000614258 4248 ntBASIC14.01□□□□□ -0.17
SPASTQ9UBP0 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms