Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
VRK1Q99986 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VRK1Q99986 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
VRK1Q99986 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.51□□□□□ -0.41
VRK1Q99986 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.51□□□□□ -0.41
VRK1Q99986 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.51□□□□□ -0.41
VRK1Q99986 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.51□□□□□ -0.41
VRK1Q99986 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.51□□□□□ -0.41
VRK1Q99986 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.51□□□□□ -0.41
VRK1Q99986 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.51□□□□□ -0.41
VRK1Q99986 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 AC012618.1-201ENST00000461223 412 ntBASIC12.51□□□□□ -0.41
VRK1Q99986 SCARNA21-201ENST00000517026 139 ntBASIC12.51□□□□□ -0.41
VRK1Q99986 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.51□□□□□ -0.41
VRK1Q99986 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
VRK1Q99986 RBM8B-201ENST00000555532 525 ntBASIC12.51□□□□□ -0.41
VRK1Q99986 RHOQP1-201ENST00000555758 579 ntBASIC12.51□□□□□ -0.41
VRK1Q99986 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.51□□□□□ -0.41
VRK1Q99986 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.51□□□□□ -0.41
VRK1Q99986 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
VRK1Q99986 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
VRK1Q99986 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
VRK1Q99986 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.51□□□□□ -0.41
VRK1Q99986 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
VRK1Q99986 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
VRK1Q99986 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.51□□□□□ -0.41
VRK1Q99986 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.51□□□□□ -0.41
VRK1Q99986 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VRK1Q99986 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.5□□□□□ -0.41
VRK1Q99986 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
VRK1Q99986 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.5□□□□□ -0.41
VRK1Q99986 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
VRK1Q99986 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.5□□□□□ -0.41
VRK1Q99986 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 RN7SKP214-201ENST00000364208 315 ntBASIC12.5□□□□□ -0.41
VRK1Q99986 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.5□□□□□ -0.41
VRK1Q99986 ACTG1P2-201ENST00000415776 1125 ntBASIC12.5□□□□□ -0.41
VRK1Q99986 ACTG1P11-201ENST00000425411 1125 ntBASIC12.5□□□□□ -0.41
VRK1Q99986 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.5□□□□□ -0.41
VRK1Q99986 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.5□□□□□ -0.41
VRK1Q99986 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 RCC2P8-201ENST00000502779 1035 ntBASIC12.5□□□□□ -0.41
VRK1Q99986 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.5□□□□□ -0.41
VRK1Q99986 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.5□□□□□ -0.41
VRK1Q99986 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.5□□□□□ -0.41
VRK1Q99986 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.5□□□□□ -0.41
VRK1Q99986 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.5□□□□□ -0.41
VRK1Q99986 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.5□□□□□ -0.41
VRK1Q99986 SNORD3B-2-202ENST00000571722 791 ntBASIC12.5□□□□□ -0.41
VRK1Q99986 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.5□□□□□ -0.41
VRK1Q99986 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 AC106872.11-201ENST00000605838 421 ntBASIC12.5□□□□□ -0.41
VRK1Q99986 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.5□□□□□ -0.41
VRK1Q99986 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.5□□□□□ -0.41
VRK1Q99986 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.5□□□□□ -0.41
VRK1Q99986 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.5□□□□□ -0.41
VRK1Q99986 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 AC008132.1-202ENST00000342005 1389 ntBASIC12.5□□□□□ -0.41
VRK1Q99986 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms