Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 KRT8P19-201ENST00000551916 1455 ntBASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 AL807761.2-201ENST00000422849 729 ntBASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 SLC25A15P3-201ENST00000505530 290 ntBASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 IGLV3-15-201ENST00000518356 244 ntBASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 AC134698.3-201ENST00000523880 214 ntBASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 AC006453.1-201ENST00000636037 1257 ntBASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 KRT8P43-201ENST00000406052 1458 ntBASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD3Q7Z3D4 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 CEP164P1-201ENST00000455142 418 ntBASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms