Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 CLUHP2-201ENST00000426660 1303 ntBASIC12.58□□□□□ -0.4
VBP1P61758 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
VBP1P61758 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.57□□□□□ -0.4
VBP1P61758 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
VBP1P61758 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.57□□□□□ -0.4
VBP1P61758 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
VBP1P61758 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
VBP1P61758 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.57□□□□□ -0.4
VBP1P61758 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
VBP1P61758 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.57□□□□□ -0.4
VBP1P61758 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 RPL13AP25-201ENST00000484130 612 ntBASIC12.57□□□□□ -0.4
VBP1P61758 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.57□□□□□ -0.4
VBP1P61758 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.57□□□□□ -0.4
VBP1P61758 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.57□□□□□ -0.4
VBP1P61758 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.57□□□□□ -0.4
VBP1P61758 AC009093.7-201ENST00000623853 1223 ntBASIC12.57□□□□□ -0.4
VBP1P61758 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.57□□□□□ -0.4
VBP1P61758 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 AL358933.1-201ENST00000565046 2830 ntBASIC12.57□□□□□ -0.4
VBP1P61758 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC12.57□□□□□ -0.4
VBP1P61758 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
VBP1P61758 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 IL9RP2-201ENST00000423948 1312 ntBASIC12.57□□□□□ -0.4
VBP1P61758 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 AC010336.1-201ENST00000539278 4739 ntBASIC12.57□□□□□ -0.4
VBP1P61758 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
VBP1P61758 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VBP1P61758 AC009093.2-202ENST00000620513 2079 ntBASIC12.57□□□□□ -0.4
VBP1P61758 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC12.57□□□□□ -0.4
VBP1P61758 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
VBP1P61758 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
VBP1P61758 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.56□□□□□ -0.4
VBP1P61758 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC12.56□□□□□ -0.4
VBP1P61758 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
VBP1P61758 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 AC087164.2-201ENST00000624514 3130 ntBASIC12.56□□□□□ -0.4
VBP1P61758 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC12.56□□□□□ -0.4
VBP1P61758 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
VBP1P61758 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.56□□□□□ -0.4
VBP1P61758 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.56□□□□□ -0.4
VBP1P61758 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.56□□□□□ -0.4
VBP1P61758 AC114501.2-201ENST00000439631 535 ntBASIC12.56□□□□□ -0.4
VBP1P61758 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.56□□□□□ -0.4
VBP1P61758 KRT18P15-201ENST00000458108 1291 ntBASIC12.56□□□□□ -0.4
VBP1P61758 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.56□□□□□ -0.4
VBP1P61758 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.56□□□□□ -0.4
VBP1P61758 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.56□□□□□ -0.4
VBP1P61758 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.56□□□□□ -0.4
VBP1P61758 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.56□□□□□ -0.4
VBP1P61758 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.56□□□□□ -0.4
VBP1P61758 AP001059.3-201ENST00000619053 235 ntBASIC12.56□□□□□ -0.4
VBP1P61758 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VBP1P61758 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms