Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.39□□□□□ -0.43
CCR9P51686 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CCR9P51686 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.39□□□□□ -0.43
CCR9P51686 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 KRT43P-201ENST00000434019 910 ntBASIC12.39□□□□□ -0.43
CCR9P51686 AC006122.1-201ENST00000493323 440 ntBASIC12.39□□□□□ -0.43
CCR9P51686 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.39□□□□□ -0.43
CCR9P51686 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.39□□□□□ -0.43
CCR9P51686 AP000812.2-201ENST00000538934 718 ntBASIC12.39□□□□□ -0.43
CCR9P51686 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.39□□□□□ -0.43
CCR9P51686 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CCR9P51686 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.39□□□□□ -0.43
CCR9P51686 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
CCR9P51686 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CCR9P51686 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 AC002350.2-201ENST00000623894 1828 ntBASIC12.39□□□□□ -0.43
CCR9P51686 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.39□□□□□ -0.43
CCR9P51686 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
CCR9P51686 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCR9P51686 AP003969.2-201ENST00000623739 2275 ntBASIC12.39□□□□□ -0.43
CCR9P51686 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
CCR9P51686 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.38□□□□□ -0.43
CCR9P51686 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.38□□□□□ -0.43
CCR9P51686 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CCR9P51686 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CCR9P51686 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CCR9P51686 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
CCR9P51686 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 MARK2P16-201ENST00000605714 1723 ntBASIC12.38□□□□□ -0.43
CCR9P51686 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.38□□□□□ -0.43
CCR9P51686 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CCR9P51686 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCR9P51686 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.38□□□□□ -0.43
CCR9P51686 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
CCR9P51686 AC092580.1-201ENST00000433998 658 ntBASIC12.38□□□□□ -0.43
CCR9P51686 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.38□□□□□ -0.43
CCR9P51686 KLF2P1-201ENST00000447438 1042 ntBASIC12.38□□□□□ -0.43
CCR9P51686 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
CCR9P51686 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.38□□□□□ -0.43
CCR9P51686 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms