Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 C17orf102-201ENST00000623254 3997 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 MIR3142HG-201ENST00000517927 2301 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 CTSE-202ENST00000360218 2071 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC8.92□□□□□ -0.98
PCP4P48539 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC8.92□□□□□ -0.98
PCP4P48539 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 RBFOX2-210ENST00000449924 1935 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 TRIM23-203ENST00000381018 1855 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 EIF4BP3-201ENST00000432132 1850 ntBASIC8.91□□□□□ -0.98
PCP4P48539 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
PCP4P48539 YPEL4-203ENST00000524669 4000 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
PCP4P48539 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 ERC1-225ENST00000611180 2832 ntTSL 5 BASIC8.91□□□□□ -0.98
PCP4P48539 RP1-201ENST00000220676 7100 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 NLRP12-201ENST00000324134 3801 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 THAP5-201ENST00000313516 1568 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC8.91□□□□□ -0.98
PCP4P48539 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PCP4P48539 TMEM255A-203ENST00000371369 3425 ntAPPRIS ALT1 TSL 2 BASIC8.91□□□□□ -0.98
PCP4P48539 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PCP4P48539 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
PCP4P48539 TIMELESS-203ENST00000553532 5121 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 KCNE1-208ENST00000611936 3222 ntAPPRIS P1 TSL 4 BASIC8.91□□□□□ -0.98
PCP4P48539 ZNF540-210ENST00000592533 3147 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
PCP4P48539 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC8.91□□□□□ -0.98
PCP4P48539 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 UQCC1-203ENST00000374380 2133 ntTSL 2 BASIC8.91□□□□□ -0.98
PCP4P48539 TNFSF11-204ENST00000405262 2135 ntTSL 5 BASIC8.91□□□□□ -0.98
PCP4P48539 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 BCAT1-204ENST00000538118 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC8.91□□□□□ -0.98
PCP4P48539 AC091153.4-201ENST00000570493 480 ntTSL 5 BASIC8.91□□□□□ -0.98
PCP4P48539 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC8.91□□□□□ -0.98
PCP4P48539 COG2-202ENST00000366669 2921 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 STXBP5-AS1-201ENST00000367477 2927 ntTSL 2 BASIC8.91□□□□□ -0.98
PCP4P48539 RP1-206ENST00000636932 3649 ntTSL 5 BASIC8.91□□□□□ -0.98
PCP4P48539 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC8.91□□□□□ -0.98
PCP4P48539 EMP2-202ENST00000359543 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 TMEM100-205ENST00000575734 1962 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
PCP4P48539 NPY2R-202ENST00000506608 3518 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC8.91□□□□□ -0.98
PCP4P48539 PACSIN1-202ENST00000374043 4229 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 SPATA31E2P-201ENST00000554414 4965 ntBASIC8.91□□□□□ -0.98
PCP4P48539 ZNF596-202ENST00000320552 2696 ntAPPRIS P1 TSL 4 BASIC8.91□□□□□ -0.98
PCP4P48539 SEC61A1-203ENST00000464451 1871 ntTSL 2 BASIC8.91□□□□□ -0.98
PCP4P48539 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC8.91□□□□□ -0.98
PCP4P48539 ITSN1-211ENST00000399355 4003 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 ADGRE2-204ENST00000392965 2513 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
PCP4P48539 PRAMEF12-201ENST00000357726 1786 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
PCP4P48539 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 CD44-201ENST00000263398 4589 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 GFM2-207ENST00000509430 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 ADD3-201ENST00000277900 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 ZIC4-201ENST00000383075 4331 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 THADA-202ENST00000402360 2974 ntTSL 5 BASIC8.91□□□□□ -0.98
PCP4P48539 SGCG-201ENST00000218867 1624 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PCP4P48539 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PCP4P48539 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC8.91□□□□□ -0.98
PCP4P48539 CHD3-201ENST00000330494 7328 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
PCP4P48539 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PCP4P48539 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
PCP4P48539 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC8.9□□□□□ -0.98
PCP4P48539 DCTN1-201ENST00000361874 4500 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
PCP4P48539 AC012651.1-204ENST00000495723 3881 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
PCP4P48539 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.98
PCP4P48539 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC8.9□□□□□ -0.98
PCP4P48539 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
PCP4P48539 AC091013.1-201ENST00000499752 3734 ntTSL 2 BASIC8.9□□□□□ -0.98
PCP4P48539 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PCP4P48539 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PCP4P48539 CECR2-201ENST00000262608 4783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PCP4P48539 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
PCP4P48539 AP005242.4-201ENST00000623533 2529 ntBASIC8.9□□□□□ -0.98
PCP4P48539 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC8.9□□□□□ -0.98
PCP4P48539 KLF7-203ENST00000421199 3037 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PCP4P48539 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
PCP4P48539 BORCS7-201ENST00000339834 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PCP4P48539 R3HDM2-202ENST00000358907 3974 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
PCP4P48539 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC8.9□□□□□ -0.98
PCP4P48539 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
PCP4P48539 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC8.9□□□□□ -0.98
PCP4P48539 ARHGAP5-AS1-201ENST00000553596 1848 ntBASIC8.9□□□□□ -0.98
PCP4P48539 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
PCP4P48539 DDR1-239ENST00000452441 3857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PCP4P48539 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PCP4P48539 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC8.9□□□□□ -0.98
PCP4P48539 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
PCP4P48539 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
PCP4P48539 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PCP4P48539 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC8.9□□□□□ -0.98
PCP4P48539 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC8.9□□□□□ -0.98
PCP4P48539 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms