RNA–Protein interactions for RNA: ENST00000405262.6

TNFSF11-204, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-204ENST00000405262 NISCHQ9Y2I1 1504 aa19.77■□□□□ 0.76
TNFSF11-204ENST00000405262 CCDC180Q9P1Z9 1646 aa17.68■□□□□ 0.42
TNFSF11-204ENST00000405262 ABCC9O60706 1549 aa17.6■□□□□ 0.41
TNFSF11-204ENST00000405262 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.27
TNFSF11-204ENST00000405262 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
TNFSF11-204ENST00000405262 NACADO15069 1562 aa16.68■□□□□ 0.26
TNFSF11-204ENST00000405262 DCAF8L2P0C7V8 631 aa16.63■□□□□ 0.25
TNFSF11-204ENST00000405262 HRCP23327 699 aa16.57■□□□□ 0.24
TNFSF11-204ENST00000405262 MYO15BQ96JP2 1530 aa16.47■□□□□ 0.23
TNFSF11-204ENST00000405262 UNC13AQ9UPW8 1703 aa16.44■□□□□ 0.22
TNFSF11-204ENST00000405262 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
TNFSF11-204ENST00000405262 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
TNFSF11-204ENST00000405262 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
TNFSF11-204ENST00000405262 BICRAQ9NZM4 1560 aa16.32■□□□□ 0.2
TNFSF11-204ENST00000405262 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
TNFSF11-204ENST00000405262 MYT1Q01538 1121 aa16.24■□□□□ 0.19
TNFSF11-204ENST00000405262 SCRIBQ14160 1630 aa16.15■□□□□ 0.18
TNFSF11-204ENST00000405262 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
TNFSF11-204ENST00000405262 AEBP2Q6ZN18 517 aaPredicted RBP16.07■□□□□ 0.16
TNFSF11-204ENST00000405262 SHROOM4Q9ULL8 1493 aa16.05■□□□□ 0.16
TNFSF11-204ENST00000405262 PPARGC1BQ86YN6 1023 aaKnown RBP15.89■□□□□ 0.13
TNFSF11-204ENST00000405262 CC2D2AQ9P2K1 1620 aa15.89■□□□□ 0.13
TNFSF11-204ENST00000405262 EIF4G1Q04637 1599 aaKnown RBP15.89■□□□□ 0.13
TNFSF11-204ENST00000405262 PCGF6Q9BYE7 350 aa15.87■□□□□ 0.13
TNFSF11-204ENST00000405262 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
TNFSF11-204ENST00000405262 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
TNFSF11-204ENST00000405262 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
TNFSF11-204ENST00000405262 SUPT5HO00267 1087 aaKnown RBP15.53■□□□□ 0.08
TNFSF11-204ENST00000405262 TRIM26Q12899 539 aaPredicted RBP15.5■□□□□ 0.07
TNFSF11-204ENST00000405262 SMARCA4P51532 1647 aa15.41■□□□□ 0.06
TNFSF11-204ENST00000405262 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
TNFSF11-204ENST00000405262 TTBK1Q5TCY1 1321 aaPredicted RBP15.4■□□□□ 0.06
TNFSF11-204ENST00000405262 ATAD2BQ9ULI0 1458 aa15.39■□□□□ 0.05
TNFSF11-204ENST00000405262 ACIN1Q9UKV3 1341 aaKnown RBP15.35■□□□□ 0.05
TNFSF11-204ENST00000405262 SMARCA2P51531 1590 aa15.33■□□□□ 0.04
TNFSF11-204ENST00000405262 BAZ1AQ9NRL2 1556 aaPredicted RBP15.33■□□□□ 0.04
TNFSF11-204ENST00000405262 HMGXB3Q12766 1538 aa15.3■□□□□ 0.04
TNFSF11-204ENST00000405262 MROH2BQ7Z745 1585 aa15.26■□□□□ 0.03
TNFSF11-204ENST00000405262 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
TNFSF11-204ENST00000405262 BAZ1BQ9UIG0 1483 aaKnown RBP15.24■□□□□ 0.03
TNFSF11-204ENST00000405262 CENPBP07199 599 aaPredicted RBP15.19■□□□□ 0.02
TNFSF11-204ENST00000405262 NESP48681 1621 aa15.17■□□□□ 0.02
TNFSF11-204ENST00000405262 NEUROD1Q13562 356 aa15.16■□□□□ 0.02
TNFSF11-204ENST00000405262 ERCC6Q03468 1493 aa15.15■□□□□ 0.02
TNFSF11-204ENST00000405262 GTF3C3Q9Y5Q9 886 aa15.12■□□□□ 0.01
TNFSF11-204ENST00000405262 WIZO95785 1651 aa15.09■□□□□ 0.01
TNFSF11-204ENST00000405262 CUX2O14529 1486 aa15.07■□□□□ 0
TNFSF11-204ENST00000405262 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
TNFSF11-204ENST00000405262 LAMC3Q9Y6N6 1575 aa15.03■□□□□ -0
TNFSF11-204ENST00000405262 RSF1Q96T23 1441 aaPredicted RBP14.98□□□□□ -0.01
TNFSF11-204ENST00000405262 THOC2Q8NI27 1593 aaKnown RBP14.97□□□□□ -0.01
TNFSF11-204ENST00000405262 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
TNFSF11-204ENST00000405262 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
TNFSF11-204ENST00000405262 CADPSQ9ULU8 1353 aa14.94□□□□□ -0.02
TNFSF11-204ENST00000405262 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
TNFSF11-204ENST00000405262 TOP2AP11388 1531 aaKnown RBP14.88□□□□□ -0.03
TNFSF11-204ENST00000405262 DIEXFQ68CQ4 756 aaKnown RBP14.87□□□□□ -0.03
TNFSF11-204ENST00000405262 MRC2Q9UBG0 1479 aa14.81□□□□□ -0.04
TNFSF11-204ENST00000405262 CFTRP13569 1480 aa14.8□□□□□ -0.04
TNFSF11-204ENST00000405262 WDR62O43379 1518 aa14.78□□□□□ -0.04
TNFSF11-204ENST00000405262 FANCD2Q9BXW9 1451 aa14.78□□□□□ -0.04
TNFSF11-204ENST00000405262 CEP164Q9UPV0 1460 aa14.78□□□□□ -0.04
TNFSF11-204ENST00000405262 BCL11AQ9H165 835 aa14.77□□□□□ -0.05
TNFSF11-204ENST00000405262 CLSPNQ9HAW4 1339 aa14.72□□□□□ -0.05
TNFSF11-204ENST00000405262 CCDC88BA6NC98 1476 aa14.72□□□□□ -0.05
TNFSF11-204ENST00000405262 TRIM41Q8WV44 630 aa14.71□□□□□ -0.05
TNFSF11-204ENST00000405262 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
TNFSF11-204ENST00000405262 ANP32EQ9BTT0 268 aa14.67□□□□□ -0.06
TNFSF11-204ENST00000405262 PRDM2Q13029 1718 aa14.67□□□□□ -0.06
TNFSF11-204ENST00000405262 CCER1Q8TC90 406 aaPredicted RBP14.66□□□□□ -0.06
TNFSF11-204ENST00000405262 FAM9AQ8IZU1 332 aaPredicted RBP14.59□□□□□ -0.07
TNFSF11-204ENST00000405262 ZNF316A6NFI3 1004 aaPredicted RBP14.58□□□□□ -0.08
TNFSF11-204ENST00000405262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
TNFSF11-204ENST00000405262 TOPBP1Q92547 1522 aa14.52□□□□□ -0.08
TNFSF11-204ENST00000405262 ZNF608Q9ULD9 1512 aaPredicted RBP14.48□□□□□ -0.09
TNFSF11-204ENST00000405262 IFT140Q96RY7 1462 aa14.47□□□□□ -0.09
TNFSF11-204ENST00000405262 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
TNFSF11-204ENST00000405262 ABCC8Q09428 1581 aa14.45□□□□□ -0.1
TNFSF11-204ENST00000405262 YTHDC1Q96MU7 727 aaKnown RBP14.44□□□□□ -0.1
TNFSF11-204ENST00000405262 PHF23Q9BUL5 403 aaPredicted RBP14.43□□□□□ -0.1
TNFSF11-204ENST00000405262 TSHZ2Q9NRE2 1034 aa14.41□□□□□ -0.1
TNFSF11-204ENST00000405262 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
TNFSF11-204ENST00000405262 EIF4G3O43432 1585 aaKnown RBP14.4□□□□□ -0.1
TNFSF11-204ENST00000405262 MIER1Q8N108 512 aa14.39□□□□□ -0.11
TNFSF11-204ENST00000405262 SUPT16HQ9Y5B9 1047 aaKnown RBP14.39□□□□□ -0.11
TNFSF11-204ENST00000405262 TARBP1Q13395 1621 aaKnown RBP14.39□□□□□ -0.11
TNFSF11-204ENST00000405262 POLA1P09884 1462 aaPredicted RBP14.38□□□□□ -0.11
TNFSF11-204ENST00000405262 PRKCSHP14314 528 aaPredicted RBP14.38□□□□□ -0.11
TNFSF11-204ENST00000405262 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
TNFSF11-204ENST00000405262 WRNQ14191 1432 aaPredicted RBP eCLIP14.36□□□□□ -0.11
TNFSF11-204ENST00000405262 ERICH6Q7L0X2 663 aa14.35□□□□□ -0.11
TNFSF11-204ENST00000405262 AQRO60306 1485 aaKnown RBP eCLIP14.35□□□□□ -0.11
TNFSF11-204ENST00000405262 RAD54L2Q9Y4B4 1467 aa14.34□□□□□ -0.11
TNFSF11-204ENST00000405262 CUX1P39880 1505 aa14.33□□□□□ -0.12
TNFSF11-204ENST00000405262 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
TNFSF11-204ENST00000405262 SOGA1O94964 1423 aa14.3□□□□□ -0.12
TNFSF11-204ENST00000405262 TDRD9Q8NDG6 1382 aaKnown RBP14.28□□□□□ -0.12
TNFSF11-204ENST00000405262 CHD1O14646 1710 aa14.27□□□□□ -0.12
TNFSF11-204ENST00000405262 RIMBP3CA6NJZ7 1639 aa14.24□□□□□ -0.13
TNFSF11-204ENST00000405262 RIMBP3BA6NNM3 1639 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms