RNA–Protein interactions for RNA: ENST00000517927.1

MIR3142HG-201, Transcript of MIR3142 host gene, humanhuman

TSL 1 (best) BASIC

Gene MIR3142HG, Length 2,301 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3142HG-201ENST00000517927 NISCHQ9Y2I1 1504 aa22.17■■□□□ 1.14
MIR3142HG-201ENST00000517927 SHROOM4Q9ULL8 1493 aa19.06■□□□□ 0.64
MIR3142HG-201ENST00000517927 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
MIR3142HG-201ENST00000517927 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
MIR3142HG-201ENST00000517927 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.59
MIR3142HG-201ENST00000517927 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
MIR3142HG-201ENST00000517927 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
MIR3142HG-201ENST00000517927 HRCP23327 699 aa18.4■□□□□ 0.54
MIR3142HG-201ENST00000517927 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
MIR3142HG-201ENST00000517927 DCAF1Q9Y4B6 1507 aa18.21■□□□□ 0.51
MIR3142HG-201ENST00000517927 PCGF6Q9BYE7 350 aa18.16■□□□□ 0.5
MIR3142HG-201ENST00000517927 PPARGC1BQ86YN6 1023 aaKnown RBP17.93■□□□□ 0.46
MIR3142HG-201ENST00000517927 LOC105371045A0A1W2PR82 267 aa17.92■□□□□ 0.46
MIR3142HG-201ENST00000517927 ABCC9O60706 1549 aa17.81■□□□□ 0.44
MIR3142HG-201ENST00000517927 TRIM26Q12899 539 aaPredicted RBP17.78■□□□□ 0.44
MIR3142HG-201ENST00000517927 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
MIR3142HG-201ENST00000517927 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
MIR3142HG-201ENST00000517927 ZEB1P37275 1124 aaPredicted RBP17.53■□□□□ 0.4
MIR3142HG-201ENST00000517927 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
MIR3142HG-201ENST00000517927 RB1CC1Q8TDY2 1594 aa17.51■□□□□ 0.39
MIR3142HG-201ENST00000517927 FAM9AQ8IZU1 332 aaPredicted RBP17.37■□□□□ 0.37
MIR3142HG-201ENST00000517927 CECR2Q9BXF3 1484 aa17.27■□□□□ 0.36
MIR3142HG-201ENST00000517927 MROH2BQ7Z745 1585 aa17.25■□□□□ 0.35
MIR3142HG-201ENST00000517927 NACADO15069 1562 aa17.24■□□□□ 0.35
MIR3142HG-201ENST00000517927 EHMT2Q96KQ7 1210 aa17.19■□□□□ 0.34
MIR3142HG-201ENST00000517927 WIZO95785 1651 aa17.16■□□□□ 0.34
MIR3142HG-201ENST00000517927 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
MIR3142HG-201ENST00000517927 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
MIR3142HG-201ENST00000517927 BAZ1AQ9NRL2 1556 aaPredicted RBP17.1■□□□□ 0.33
MIR3142HG-201ENST00000517927 EIF4G1Q04637 1599 aaKnown RBP17.09■□□□□ 0.33
MIR3142HG-201ENST00000517927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
MIR3142HG-201ENST00000517927 CCER1Q8TC90 406 aaPredicted RBP16.96■□□□□ 0.31
MIR3142HG-201ENST00000517927 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
MIR3142HG-201ENST00000517927 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
MIR3142HG-201ENST00000517927 ACIN1Q9UKV3 1341 aaKnown RBP16.88■□□□□ 0.29
MIR3142HG-201ENST00000517927 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
MIR3142HG-201ENST00000517927 ABCC8Q09428 1581 aa16.87■□□□□ 0.29
MIR3142HG-201ENST00000517927 CEP162Q5TB80 1403 aa16.84■□□□□ 0.29
MIR3142HG-201ENST00000517927 SMARCA2P51531 1590 aa16.83■□□□□ 0.28
MIR3142HG-201ENST00000517927 SMARCA4P51532 1647 aa16.82■□□□□ 0.28
MIR3142HG-201ENST00000517927 TNIKQ9UKE5 1360 aa16.81■□□□□ 0.28
MIR3142HG-201ENST00000517927 NEUROD1Q13562 356 aa16.81■□□□□ 0.28
MIR3142HG-201ENST00000517927 DIEXFQ68CQ4 756 aaKnown RBP16.8■□□□□ 0.28
MIR3142HG-201ENST00000517927 SOGA1O94964 1423 aa16.78■□□□□ 0.28
MIR3142HG-201ENST00000517927 EEA1Q15075 1411 aa16.77■□□□□ 0.27
MIR3142HG-201ENST00000517927 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
MIR3142HG-201ENST00000517927 CENPBP07199 599 aaPredicted RBP16.71■□□□□ 0.27
MIR3142HG-201ENST00000517927 CSRNP3Q8WYN3 585 aa16.71■□□□□ 0.27
MIR3142HG-201ENST00000517927 RUSC2Q8N2Y8 1516 aa16.68■□□□□ 0.26
MIR3142HG-201ENST00000517927 GTF3C3Q9Y5Q9 886 aa16.66■□□□□ 0.26
MIR3142HG-201ENST00000517927 GOLGA3Q08378 1498 aa16.66■□□□□ 0.26
MIR3142HG-201ENST00000517927 UBTFP17480 764 aaKnown RBP16.64■□□□□ 0.25
MIR3142HG-201ENST00000517927 UNC13AQ9UPW8 1703 aa16.63■□□□□ 0.25
MIR3142HG-201ENST00000517927 ZNF316A6NFI3 1004 aaPredicted RBP16.62■□□□□ 0.25
MIR3142HG-201ENST00000517927 CEP164Q9UPV0 1460 aa16.53■□□□□ 0.24
MIR3142HG-201ENST00000517927 KIF21BO75037 1637 aa16.52■□□□□ 0.23
MIR3142HG-201ENST00000517927 PEG3Q9GZU2 1588 aa16.5■□□□□ 0.23
MIR3142HG-201ENST00000517927 SYNJ1O43426 1573 aa16.47■□□□□ 0.23
MIR3142HG-201ENST00000517927 CLIP1P30622 1438 aa16.46■□□□□ 0.23
MIR3142HG-201ENST00000517927 VPS8Q8N3P4 1428 aa16.44■□□□□ 0.22
MIR3142HG-201ENST00000517927 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
MIR3142HG-201ENST00000517927 BICRAQ9NZM4 1560 aa16.43■□□□□ 0.22
MIR3142HG-201ENST00000517927 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
MIR3142HG-201ENST00000517927 MIER1Q8N108 512 aa16.4■□□□□ 0.22
MIR3142HG-201ENST00000517927 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
MIR3142HG-201ENST00000517927 YTHDC1Q96MU7 727 aaKnown RBP16.38■□□□□ 0.21
MIR3142HG-201ENST00000517927 RAPGEF2Q9Y4G8 1499 aa16.36■□□□□ 0.21
MIR3142HG-201ENST00000517927 MYT1Q01538 1121 aa16.34■□□□□ 0.21
MIR3142HG-201ENST00000517927 APLP2Q06481 763 aa16.34■□□□□ 0.21
MIR3142HG-201ENST00000517927 ATAD2BQ9ULI0 1458 aa16.33■□□□□ 0.2
MIR3142HG-201ENST00000517927 CLSPNQ9HAW4 1339 aa16.26■□□□□ 0.19
MIR3142HG-201ENST00000517927 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
MIR3142HG-201ENST00000517927 DHX57Q6P158 1386 aaKnown RBP16.21■□□□□ 0.19
MIR3142HG-201ENST00000517927 ERICH3Q5RHP9 1530 aa16.21■□□□□ 0.19
MIR3142HG-201ENST00000517927 RANGAP1P46060 587 aaPredicted RBP16.2■□□□□ 0.18
MIR3142HG-201ENST00000517927 BIVM-ERCC5R4GMW8 1640 aa16.2■□□□□ 0.18
MIR3142HG-201ENST00000517927 ARAP1Q96P48 1450 aa16.19■□□□□ 0.18
MIR3142HG-201ENST00000517927 PRXQ9BXM0 1461 aa16.19■□□□□ 0.18
MIR3142HG-201ENST00000517927 RRBP1Q9P2E9 1410 aaKnown RBP16.12■□□□□ 0.17
MIR3142HG-201ENST00000517927 KANK4Q5T7N3 995 aaPredicted RBP16.12■□□□□ 0.17
MIR3142HG-201ENST00000517927 CUX2O14529 1486 aa16.08■□□□□ 0.17
MIR3142HG-201ENST00000517927 CUX1P39880 1505 aa16.04■□□□□ 0.16
MIR3142HG-201ENST00000517927 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
MIR3142HG-201ENST00000517927 CCNB3Q8WWL7 1395 aa16.01■□□□□ 0.15
MIR3142HG-201ENST00000517927 SUPT16HQ9Y5B9 1047 aaKnown RBP16■□□□□ 0.15
MIR3142HG-201ENST00000517927 ARHGAP35Q9NRY4 1499 aa15.99■□□□□ 0.15
MIR3142HG-201ENST00000517927 HMGXB3Q12766 1538 aa15.98■□□□□ 0.15
MIR3142HG-201ENST00000517927 NCAPD3P42695 1498 aa15.96■□□□□ 0.15
MIR3142HG-201ENST00000517927 CFTRP13569 1480 aa15.91■□□□□ 0.14
MIR3142HG-201ENST00000517927 RAB3GAP2Q9H2M9 1393 aa15.9■□□□□ 0.14
MIR3142HG-201ENST00000517927 MAPKBP1O60336 1514 aa15.9■□□□□ 0.14
MIR3142HG-201ENST00000517927 MAP3K1Q13233 1512 aa15.9■□□□□ 0.14
MIR3142HG-201ENST00000517927 ITGAEP38570 1179 aa15.88■□□□□ 0.13
MIR3142HG-201ENST00000517927 TIAM1Q13009 1591 aa15.87■□□□□ 0.13
MIR3142HG-201ENST00000517927 IGF1RP08069 1367 aa15.84■□□□□ 0.13
MIR3142HG-201ENST00000517927 SETD5Q9C0A6 1442 aa15.84■□□□□ 0.13
MIR3142HG-201ENST00000517927 TSHZ2Q9NRE2 1034 aa15.82■□□□□ 0.12
MIR3142HG-201ENST00000517927 KCNH8Q96L42 1107 aa15.81■□□□□ 0.12
MIR3142HG-201ENST00000517927 LRRC9Q6ZRR7 1453 aa15.81■□□□□ 0.12
MIR3142HG-201ENST00000517927 PHLDB1Q86UU1 1377 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms