Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.66□□□□□ -0.38
APOBEC1P41238 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.66□□□□□ -0.38
APOBEC1P41238 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.66□□□□□ -0.38
APOBEC1P41238 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.66□□□□□ -0.38
APOBEC1P41238 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.66□□□□□ -0.38
APOBEC1P41238 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.66□□□□□ -0.38
APOBEC1P41238 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
APOBEC1P41238 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.66□□□□□ -0.38
APOBEC1P41238 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
APOBEC1P41238 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 KRT8P18-201ENST00000413425 1445 ntBASIC12.66□□□□□ -0.38
APOBEC1P41238 TBC1D3J-201ENST00000620719 1426 ntBASIC12.66□□□□□ -0.38
APOBEC1P41238 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
APOBEC1P41238 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
APOBEC1P41238 MIR557-201ENST00000385239 98 ntBASIC12.66□□□□□ -0.38
APOBEC1P41238 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.66□□□□□ -0.38
APOBEC1P41238 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.66□□□□□ -0.38
APOBEC1P41238 AL807761.2-201ENST00000422849 729 ntBASIC12.66□□□□□ -0.38
APOBEC1P41238 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.66□□□□□ -0.38
APOBEC1P41238 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.66□□□□□ -0.38
APOBEC1P41238 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.66□□□□□ -0.38
APOBEC1P41238 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
APOBEC1P41238 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.66□□□□□ -0.38
APOBEC1P41238 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.66□□□□□ -0.38
APOBEC1P41238 AC245884.6-201ENST00000515672 1067 ntBASIC12.66□□□□□ -0.38
APOBEC1P41238 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.66□□□□□ -0.38
APOBEC1P41238 SIGLEC18P-201ENST00000602271 909 ntBASIC12.66□□□□□ -0.38
APOBEC1P41238 AC009560.1-201ENST00000620208 434 ntBASIC12.66□□□□□ -0.38
APOBEC1P41238 AL161773.1-201ENST00000624845 863 ntBASIC12.66□□□□□ -0.38
APOBEC1P41238 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.66□□□□□ -0.38
APOBEC1P41238 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.66□□□□□ -0.38
APOBEC1P41238 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.66□□□□□ -0.38
APOBEC1P41238 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
APOBEC1P41238 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.66□□□□□ -0.38
APOBEC1P41238 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
APOBEC1P41238 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
APOBEC1P41238 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
APOBEC1P41238 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.66□□□□□ -0.38
APOBEC1P41238 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOBEC1P41238 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.65□□□□□ -0.38
APOBEC1P41238 AC135782.3-201ENST00000562782 2105 ntBASIC12.65□□□□□ -0.38
APOBEC1P41238 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.65□□□□□ -0.38
APOBEC1P41238 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.65□□□□□ -0.38
APOBEC1P41238 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
APOBEC1P41238 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.65□□□□□ -0.38
APOBEC1P41238 AC138761.6-201ENST00000583997 1423 ntBASIC12.65□□□□□ -0.38
APOBEC1P41238 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.65□□□□□ -0.38
APOBEC1P41238 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
APOBEC1P41238 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 AL592076.1-201ENST00000424448 303 ntBASIC12.65□□□□□ -0.38
APOBEC1P41238 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.65□□□□□ -0.38
APOBEC1P41238 AC007279.1-201ENST00000448547 837 ntBASIC12.65□□□□□ -0.38
APOBEC1P41238 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.65□□□□□ -0.38
APOBEC1P41238 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
APOBEC1P41238 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.65□□□□□ -0.38
APOBEC1P41238 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.65□□□□□ -0.38
APOBEC1P41238 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.65□□□□□ -0.38
APOBEC1P41238 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.65□□□□□ -0.38
APOBEC1P41238 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.65□□□□□ -0.38
APOBEC1P41238 KLF17P1-201ENST00000547105 1126 ntBASIC12.65□□□□□ -0.38
APOBEC1P41238 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.65□□□□□ -0.38
APOBEC1P41238 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.65□□□□□ -0.38
APOBEC1P41238 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.65□□□□□ -0.38
APOBEC1P41238 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
APOBEC1P41238 RN7SL574P-201ENST00000581512 297 ntBASIC12.65□□□□□ -0.38
APOBEC1P41238 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
APOBEC1P41238 AC012044.1-201ENST00000603431 297 ntBASIC12.65□□□□□ -0.38
APOBEC1P41238 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
APOBEC1P41238 AC091812.3-201ENST00000621362 345 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms