Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CEACAM3P40198 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.51□□□□□ -0.57
CEACAM3P40198 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CEACAM3P40198 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC11.51□□□□□ -0.57
CEACAM3P40198 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 BANF1P3-201ENST00000412556 261 ntBASIC11.51□□□□□ -0.57
CEACAM3P40198 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC11.51□□□□□ -0.57
CEACAM3P40198 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC11.51□□□□□ -0.57
CEACAM3P40198 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC11.51□□□□□ -0.57
CEACAM3P40198 AC012618.1-201ENST00000461223 412 ntBASIC11.51□□□□□ -0.57
CEACAM3P40198 AC024681.1-201ENST00000521917 487 ntBASIC11.51□□□□□ -0.57
CEACAM3P40198 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC11.51□□□□□ -0.57
CEACAM3P40198 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC11.51□□□□□ -0.57
CEACAM3P40198 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC11.51□□□□□ -0.57
CEACAM3P40198 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC11.51□□□□□ -0.57
CEACAM3P40198 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
CEACAM3P40198 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.51□□□□□ -0.57
CEACAM3P40198 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
CEACAM3P40198 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CEACAM3P40198 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 CICP16-201ENST00000502609 2813 ntBASIC11.51□□□□□ -0.57
CEACAM3P40198 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.51□□□□□ -0.57
CEACAM3P40198 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.51□□□□□ -0.57
CEACAM3P40198 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.51□□□□□ -0.57
CEACAM3P40198 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC11.51□□□□□ -0.57
CEACAM3P40198 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 DUT-208ENST00000559540 1441 ntTSL 2 BASIC11.51□□□□□ -0.57
CEACAM3P40198 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.5□□□□□ -0.57
CEACAM3P40198 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.5□□□□□ -0.57
CEACAM3P40198 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CEACAM3P40198 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 AC011474.4-201ENST00000623523 2076 ntBASIC11.5□□□□□ -0.57
CEACAM3P40198 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 KRT17P5-201ENST00000332088 839 ntBASIC11.5□□□□□ -0.57
CEACAM3P40198 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 AL662890.1-201ENST00000396818 632 ntBASIC11.5□□□□□ -0.57
CEACAM3P40198 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 BX679664.3-201ENST00000414070 555 ntBASIC11.5□□□□□ -0.57
CEACAM3P40198 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC11.5□□□□□ -0.57
CEACAM3P40198 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC11.5□□□□□ -0.57
CEACAM3P40198 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC11.5□□□□□ -0.57
CEACAM3P40198 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC11.5□□□□□ -0.57
CEACAM3P40198 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC11.5□□□□□ -0.57
CEACAM3P40198 AC113935.1-201ENST00000471722 555 ntBASIC11.5□□□□□ -0.57
CEACAM3P40198 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC11.5□□□□□ -0.57
CEACAM3P40198 AC114947.1-202ENST00000514136 344 ntBASIC11.5□□□□□ -0.57
CEACAM3P40198 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC11.5□□□□□ -0.57
CEACAM3P40198 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 NOP2-211ENST00000540228 668 ntTSL 2 BASIC11.5□□□□□ -0.57
CEACAM3P40198 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC11.5□□□□□ -0.57
CEACAM3P40198 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC11.5□□□□□ -0.57
CEACAM3P40198 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC11.5□□□□□ -0.57
CEACAM3P40198 CR392039.2-201ENST00000623182 509 ntBASIC11.5□□□□□ -0.57
CEACAM3P40198 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC11.5□□□□□ -0.57
CEACAM3P40198 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CEACAM3P40198 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms