Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.31□□□□□ -0.12
FDFT1P37268 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.31□□□□□ -0.12
FDFT1P37268 AC091271.1-201ENST00000611877 1162 ntBASIC14.31□□□□□ -0.12
FDFT1P37268 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.31□□□□□ -0.12
FDFT1P37268 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
FDFT1P37268 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.31□□□□□ -0.12
FDFT1P37268 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.31□□□□□ -0.12
FDFT1P37268 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
FDFT1P37268 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.3□□□□□ -0.12
FDFT1P37268 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
FDFT1P37268 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.3□□□□□ -0.12
FDFT1P37268 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.3□□□□□ -0.12
FDFT1P37268 Z98885.3-201ENST00000624882 1757 ntBASIC14.3□□□□□ -0.12
FDFT1P37268 AC005014.1-201ENST00000432006 2976 ntBASIC14.3□□□□□ -0.12
FDFT1P37268 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.3□□□□□ -0.12
FDFT1P37268 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 RNA5SP359-201ENST00000364838 113 ntBASIC14.3□□□□□ -0.12
FDFT1P37268 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.3□□□□□ -0.12
FDFT1P37268 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.3□□□□□ -0.12
FDFT1P37268 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.3□□□□□ -0.12
FDFT1P37268 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.3□□□□□ -0.12
FDFT1P37268 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.3□□□□□ -0.12
FDFT1P37268 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.3□□□□□ -0.12
FDFT1P37268 AC116345.2-201ENST00000512837 523 ntBASIC14.3□□□□□ -0.12
FDFT1P37268 AC005740.1-201ENST00000515639 522 ntBASIC14.3□□□□□ -0.12
FDFT1P37268 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
FDFT1P37268 KRT8P1-201ENST00000557533 1207 ntBASIC14.3□□□□□ -0.12
FDFT1P37268 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.3□□□□□ -0.12
FDFT1P37268 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.3□□□□□ -0.12
FDFT1P37268 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.3□□□□□ -0.12
FDFT1P37268 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
FDFT1P37268 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.3□□□□□ -0.12
FDFT1P37268 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.3□□□□□ -0.12
FDFT1P37268 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.3□□□□□ -0.12
FDFT1P37268 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.3□□□□□ -0.12
FDFT1P37268 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.3□□□□□ -0.12
FDFT1P37268 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
FDFT1P37268 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.3□□□□□ -0.12
FDFT1P37268 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.3□□□□□ -0.12
FDFT1P37268 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.3□□□□□ -0.12
FDFT1P37268 AC004554.1-201ENST00000422830 1468 ntBASIC14.3□□□□□ -0.12
FDFT1P37268 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.3□□□□□ -0.12
FDFT1P37268 AC024075.2-201ENST00000598112 1473 ntBASIC14.3□□□□□ -0.12
FDFT1P37268 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
FDFT1P37268 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
FDFT1P37268 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.3□□□□□ -0.12
FDFT1P37268 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.3□□□□□ -0.12
FDFT1P37268 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FDFT1P37268 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.3□□□□□ -0.12
FDFT1P37268 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
FDFT1P37268 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.29□□□□□ -0.12
FDFT1P37268 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
FDFT1P37268 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
FDFT1P37268 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
FDFT1P37268 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
FDFT1P37268 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.29□□□□□ -0.12
FDFT1P37268 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.29□□□□□ -0.12
FDFT1P37268 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.29□□□□□ -0.12
FDFT1P37268 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms