Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB4AP20338 HLA-A-201ENST00000376802 1334 ntBASIC10.8□□□□□ -0.68
RAB4AP20338 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB4AP20338 GHET1-201ENST00000627071 1906 ntBASIC10.8□□□□□ -0.68
RAB4AP20338 FER1L5-205ENST00000623246 6513 ntTSL 5 BASIC10.8□□□□□ -0.68
RAB4AP20338 PDE4C-206ENST00000594465 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
RAB4AP20338 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC10.79□□□□□ -0.68
RAB4AP20338 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC10.79□□□□□ -0.68
RAB4AP20338 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC10.79□□□□□ -0.68
RAB4AP20338 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 PES1-203ENST00000402281 2760 ntTSL 2 BASIC10.79□□□□□ -0.68
RAB4AP20338 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.79□□□□□ -0.68
RAB4AP20338 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 TMPRSS3-201ENST00000291532 3193 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 LMOD3-203ENST00000489031 2221 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
RAB4AP20338 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC10.79□□□□□ -0.68
RAB4AP20338 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC10.79□□□□□ -0.68
RAB4AP20338 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC10.79□□□□□ -0.68
RAB4AP20338 GATD1-206ENST00000526325 756 ntTSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 TSFM-210ENST00000550559 897 ntTSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC10.79□□□□□ -0.68
RAB4AP20338 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC10.79□□□□□ -0.68
RAB4AP20338 SLC25A6P4-201ENST00000586535 553 ntBASIC10.79□□□□□ -0.68
RAB4AP20338 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 AC009955.4-201ENST00000597192 544 ntBASIC10.79□□□□□ -0.68
RAB4AP20338 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
RAB4AP20338 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 ATP2C2-201ENST00000262429 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 AL158070.2-201ENST00000623713 1621 ntBASIC10.79□□□□□ -0.68
RAB4AP20338 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC10.79□□□□□ -0.68
RAB4AP20338 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 F2-205ENST00000530231 1849 ntTSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 CCDC36-204ENST00000452691 2315 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
RAB4AP20338 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
RAB4AP20338 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
RAB4AP20338 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RAB4AP20338 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 CEP89-201ENST00000305768 5678 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 ABCC8-201ENST00000302539 4923 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
RAB4AP20338 SLC18A1-204ENST00000437980 2822 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB4AP20338 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
RAB4AP20338 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
RAB4AP20338 PTGIS-201ENST00000244043 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC10.78□□□□□ -0.68
RAB4AP20338 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC10.78□□□□□ -0.68
RAB4AP20338 AL645937.2-201ENST00000396808 931 ntBASIC10.78□□□□□ -0.68
RAB4AP20338 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.78□□□□□ -0.68
RAB4AP20338 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC10.78□□□□□ -0.68
RAB4AP20338 AC005237.2-201ENST00000434368 219 ntBASIC10.78□□□□□ -0.68
RAB4AP20338 AL591424.1-201ENST00000442569 1213 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms