Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 AC126915.1-201ENST00000522847 1038 ntBASIC14.28□□□□□ -0.12
CCDC78A2IDD5 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 AP000346.4-201ENST00000614827 381 ntBASIC14.28□□□□□ -0.12
CCDC78A2IDD5 AL136295.7-201ENST00000619226 1200 ntBASIC14.28□□□□□ -0.12
CCDC78A2IDD5 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 AC099521.3-201ENST00000624251 2938 ntBASIC14.28□□□□□ -0.12
CCDC78A2IDD5 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC78A2IDD5 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.27□□□□□ -0.13
CCDC78A2IDD5 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 MIR6869-201ENST00000619434 62 ntBASIC14.27□□□□□ -0.13
CCDC78A2IDD5 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 LINC00638-201ENST00000555578 2518 ntBASIC14.27□□□□□ -0.13
CCDC78A2IDD5 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CCDC78A2IDD5 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms