Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 AC106794.1-201ENST00000506935 792 ntBASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR1DQ9Y2S0 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 AC061965.1-201ENST00000560524 1465 ntBASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 TNRC18P1-201ENST00000502875 3650 ntBASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 OR2R1P-201ENST00000441404 914 ntBASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 RPL18P13-201ENST00000478088 569 ntBASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 RPSAP36-202ENST00000494591 1261 ntBASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 SCARNA21-201ENST00000517026 139 ntBASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 AC003686.1-201ENST00000550956 1034 ntBASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 AL136295.7-201ENST00000619226 1200 ntBASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 AC092299.1-201ENST00000632679 757 ntBASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms