Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 GCSHP3-201ENST00000431120 391 ntBASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 XBP1P1-201ENST00000436573 652 ntBASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 AC093909.3-201ENST00000504783 336 ntBASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 AC027237.1-201ENST00000560942 655 ntBASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 AP000322.3-201ENST00000608665 388 ntBASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 AC018695.6-201ENST00000614011 534 ntBASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 AC002472.4-201ENST00000641915 272 ntBASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CPNE5Q9HCH3 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 MARK2P16-201ENST00000605714 1723 ntBASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 DPY19L2P5-201ENST00000456300 331 ntBASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 AC131206.1-201ENST00000538078 1211 ntBASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 HERC2P11-201ENST00000562845 725 ntBASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 AC100756.2-201ENST00000569537 736 ntBASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 AC011471.3-201ENST00000623576 402 ntBASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE5Q9HCH3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms