Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 OR52M2P-201ENST00000414298 959 ntBASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 ACTG1P19-201ENST00000418987 1116 ntBASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 BCAS2P2-201ENST00000425064 674 ntBASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 GCSHP3-201ENST00000431120 391 ntBASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 AC092573.1-201ENST00000433054 884 ntBASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 GOLGA2P8-201ENST00000505201 779 ntBASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 AL359091.4-201ENST00000610052 409 ntBASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 AC012617.1-204ENST00000586340 2305 ntBASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 CTBP2P8-201ENST00000422584 1330 ntBASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 NUTM2HP-201ENST00000442076 2498 ntBASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 KRT18P15-201ENST00000458108 1291 ntBASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 AC138466.4-201ENST00000623965 852 ntBASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.69□□□□□ -0.06
SHKBP1Q8TBC3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms