Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.04■□□□□ -0
BEST2Q8NFU1 AL049840.2-201ENST00000602722 535 ntBASIC15.04■□□□□ -0
BEST2Q8NFU1 MIR6858-201ENST00000620733 67 ntBASIC15.04■□□□□ -0
BEST2Q8NFU1 AC073911.3-201ENST00000624401 631 ntBASIC15.04■□□□□ -0
BEST2Q8NFU1 LINC00244-201ENST00000625073 613 ntBASIC15.04■□□□□ -0
BEST2Q8NFU1 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
BEST2Q8NFU1 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BEST2Q8NFU1 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
BEST2Q8NFU1 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
BEST2Q8NFU1 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.04■□□□□ -0
BEST2Q8NFU1 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
BEST2Q8NFU1 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
BEST2Q8NFU1 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BEST2Q8NFU1 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
BEST2Q8NFU1 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BEST2Q8NFU1 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
BEST2Q8NFU1 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.04■□□□□ -0
BEST2Q8NFU1 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.04■□□□□ -0
BEST2Q8NFU1 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BEST2Q8NFU1 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BEST2Q8NFU1 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.03■□□□□ -0
BEST2Q8NFU1 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BEST2Q8NFU1 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.03■□□□□ -0
BEST2Q8NFU1 FMO6P-201ENST00000236166 1620 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
BEST2Q8NFU1 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.03■□□□□ -0
BEST2Q8NFU1 AL928921.2-201ENST00000641325 2442 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.03■□□□□ -0
BEST2Q8NFU1 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BEST2Q8NFU1 AL031595.1-201ENST00000623969 4709 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BEST2Q8NFU1 RNVU1-8-201ENST00000364272 125 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.03■□□□□ -0
BEST2Q8NFU1 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.03■□□□□ -0
BEST2Q8NFU1 LYPLA2P1-203ENST00000447689 696 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.03■□□□□ -0
BEST2Q8NFU1 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.03■□□□□ -0
BEST2Q8NFU1 PRSS3P1-201ENST00000503996 742 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.03■□□□□ -0
BEST2Q8NFU1 RN7SKP155-201ENST00000516031 288 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 RNA5SP406-201ENST00000516106 112 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.03■□□□□ -0
BEST2Q8NFU1 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.03■□□□□ -0
BEST2Q8NFU1 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
BEST2Q8NFU1 AP003398.1-201ENST00000531124 318 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 CR383656.3-201ENST00000551315 183 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.03■□□□□ -0
BEST2Q8NFU1 RN7SL357P-201ENST00000581065 298 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.03■□□□□ -0
BEST2Q8NFU1 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.03■□□□□ -0
BEST2Q8NFU1 AC005041.3-201ENST00000606287 649 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.03■□□□□ -0
BEST2Q8NFU1 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.03■□□□□ -0
BEST2Q8NFU1 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
BEST2Q8NFU1 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
BEST2Q8NFU1 AC138969.2-201ENST00000532739 9932 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BEST2Q8NFU1 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
BEST2Q8NFU1 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
BEST2Q8NFU1 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.03■□□□□ -0
BEST2Q8NFU1 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BEST2Q8NFU1 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.03■□□□□ -0
BEST2Q8NFU1 SNX18-202ENST00000343017 3140 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BEST2Q8NFU1 PES1P2-201ENST00000449745 1735 ntBASIC15.03■□□□□ -0
BEST2Q8NFU1 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
BEST2Q8NFU1 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BEST2Q8NFU1 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
BEST2Q8NFU1 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.03■□□□□ -0
BEST2Q8NFU1 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BEST2Q8NFU1 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.02■□□□□ -0
BEST2Q8NFU1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.02■□□□□ -0
BEST2Q8NFU1 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BEST2Q8NFU1 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BEST2Q8NFU1 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.02■□□□□ -0
BEST2Q8NFU1 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
BEST2Q8NFU1 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
BEST2Q8NFU1 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
BEST2Q8NFU1 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
BEST2Q8NFU1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.02■□□□□ -0
BEST2Q8NFU1 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
BEST2Q8NFU1 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.02■□□□□ -0
BEST2Q8NFU1 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
BEST2Q8NFU1 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
BEST2Q8NFU1 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BEST2Q8NFU1 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.02■□□□□ -0
BEST2Q8NFU1 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BEST2Q8NFU1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.02■□□□□ -0
BEST2Q8NFU1 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.02■□□□□ -0
BEST2Q8NFU1 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BEST2Q8NFU1 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
BEST2Q8NFU1 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
BEST2Q8NFU1 OR52M2P-201ENST00000414298 959 ntBASIC15.02■□□□□ -0
BEST2Q8NFU1 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.02■□□□□ -0
BEST2Q8NFU1 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.02■□□□□ -0
BEST2Q8NFU1 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.02■□□□□ -0
BEST2Q8NFU1 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.02■□□□□ -0
BEST2Q8NFU1 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.02■□□□□ -0
BEST2Q8NFU1 RN7SL375P-201ENST00000492442 298 ntBASIC15.02■□□□□ -0
BEST2Q8NFU1 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms