Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 AL157792.1-201ENST00000488281 530 ntBASIC15.6■□□□□ 0.09
TRIM50Q86XT4 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 TRMT112P3-201ENST00000580149 358 ntBASIC15.6■□□□□ 0.09
TRIM50Q86XT4 MIR4472-1-201ENST00000584349 80 ntBASIC15.6■□□□□ 0.09
TRIM50Q86XT4 AC012073.1-201ENST00000606114 1108 ntBASIC15.6■□□□□ 0.09
TRIM50Q86XT4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 HSPA7-201ENST00000445535 1927 ntBASIC15.6■□□□□ 0.09
TRIM50Q86XT4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 AL157996.1-201ENST00000624684 2299 ntBASIC15.59■□□□□ 0.09
TRIM50Q86XT4 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 OR7E115P-201ENST00000382617 1024 ntBASIC15.59■□□□□ 0.09
TRIM50Q86XT4 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 OR2A1-AS1-210ENST00000496968 531 ntBASIC15.59■□□□□ 0.09
TRIM50Q86XT4 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 AL049840.2-201ENST00000602722 535 ntBASIC15.59■□□□□ 0.09
TRIM50Q86XT4 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 AC010976.2-201ENST00000609697 852 ntBASIC15.59■□□□□ 0.09
TRIM50Q86XT4 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
TRIM50Q86XT4 LINC01230-201ENST00000625222 3017 ntBASIC15.59■□□□□ 0.09
TRIM50Q86XT4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.58■□□□□ 0.09
TRIM50Q86XT4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM50Q86XT4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM50Q86XT4 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.58■□□□□ 0.09
TRIM50Q86XT4 AC016397.2-201ENST00000624848 1985 ntBASIC15.58■□□□□ 0.09
TRIM50Q86XT4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.58■□□□□ 0.09
TRIM50Q86XT4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
TRIM50Q86XT4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM50Q86XT4 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM50Q86XT4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM50Q86XT4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 AC006529.1-201ENST00000459978 637 ntBASIC15.58■□□□□ 0.08
TRIM50Q86XT4 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms