Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 PMF1-201ENST00000368273 884 ntTSL 2 BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 AC007679.1-201ENST00000458609 502 ntBASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 SFPQP1-201ENST00000446621 1786 ntBASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPHKAPQ2M3C7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 AC011239.2-201ENST00000624820 1489 ntBASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 DDC-214ENST00000622873 1839 ntTSL 3 BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 MARCKSL1P2-201ENST00000401037 976 ntBASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 AL356000.1-201ENST00000441073 1238 ntBASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 KRT18P42-201ENST00000505048 1255 ntBASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 MBP-230ENST00000528160 584 ntTSL 5 BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 PMEL-214ENST00000550447 901 ntTSL 3 BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHKAPQ2M3C7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 AP001331.1-201ENST00000413008 1015 ntBASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 TULP3P1-202ENST00000453253 1291 ntBASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 HNRNPA1P42-201ENST00000458678 957 ntBASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 AC011431.1-201ENST00000512971 230 ntBASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 ABCC6P1-203ENST00000565566 1170 ntBASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 RN7SL480P-201ENST00000581481 294 ntBASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC19.38■□□□□ 0.69
SPHKAPQ2M3C7 AC008038.1-201ENST00000634247 1314 ntBASIC19.37■□□□□ 0.69
SPHKAPQ2M3C7 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SPHKAPQ2M3C7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPHKAPQ2M3C7 RFNG-202ENST00000429557 994 ntTSL 5 BASIC19.37■□□□□ 0.69
SPHKAPQ2M3C7 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms