Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RIPPLY3P57055 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
RIPPLY3P57055 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC11.76□□□□□ -0.53
RIPPLY3P57055 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RIPPLY3P57055 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RIPPLY3P57055 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RIPPLY3P57055 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.76□□□□□ -0.53
RIPPLY3P57055 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RIPPLY3P57055 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.76□□□□□ -0.53
RIPPLY3P57055 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RIPPLY3P57055 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RIPPLY3P57055 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RIPPLY3P57055 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC11.76□□□□□ -0.53
RIPPLY3P57055 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RIPPLY3P57055 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.76□□□□□ -0.53
RIPPLY3P57055 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.76□□□□□ -0.53
RIPPLY3P57055 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RIPPLY3P57055 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RIPPLY3P57055 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RIPPLY3P57055 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RIPPLY3P57055 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RIPPLY3P57055 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RIPPLY3P57055 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RIPPLY3P57055 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 API5-208ENST00000531273 1868 ntTSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 TUBB2BP1-201ENST00000404155 871 ntBASIC11.75□□□□□ -0.53
RIPPLY3P57055 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 TPT1P9-201ENST00000413759 514 ntBASIC11.75□□□□□ -0.53
RIPPLY3P57055 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 XBP1P1-201ENST00000436573 652 ntBASIC11.75□□□□□ -0.53
RIPPLY3P57055 AC007679.1-201ENST00000458609 502 ntBASIC11.75□□□□□ -0.53
RIPPLY3P57055 RN7SL530P-201ENST00000485097 298 ntBASIC11.75□□□□□ -0.53
RIPPLY3P57055 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 AP001505.1-201ENST00000569966 824 ntBASIC11.75□□□□□ -0.53
RIPPLY3P57055 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC11.75□□□□□ -0.53
RIPPLY3P57055 AC139713.2-207ENST00000641556 1292 ntBASIC11.75□□□□□ -0.53
RIPPLY3P57055 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.75□□□□□ -0.53
RIPPLY3P57055 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RIPPLY3P57055 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
RIPPLY3P57055 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.74□□□□□ -0.53
RIPPLY3P57055 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC11.74□□□□□ -0.53
RIPPLY3P57055 AC011700.1-201ENST00000610409 2627 ntBASIC11.74□□□□□ -0.53
RIPPLY3P57055 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
RIPPLY3P57055 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
RIPPLY3P57055 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RIPPLY3P57055 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RIPPLY3P57055 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms