Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCKAP1LP55160 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCKAP1LP55160 C8orf49-201ENST00000525043 1968 ntBASIC15.27■□□□□ 0.04
NCKAP1LP55160 RCC2P5-201ENST00000492126 1487 ntBASIC15.27■□□□□ 0.04
NCKAP1LP55160 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 AC020763.3-201ENST00000625095 2904 ntBASIC15.27■□□□□ 0.04
NCKAP1LP55160 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NCKAP1LP55160 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCKAP1LP55160 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCKAP1LP55160 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCKAP1LP55160 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCKAP1LP55160 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCKAP1LP55160 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCKAP1LP55160 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCKAP1LP55160 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCKAP1LP55160 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 AC106827.1-201ENST00000366454 431 ntBASIC15.27■□□□□ 0.04
NCKAP1LP55160 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 STK24P1-201ENST00000455035 1291 ntBASIC15.27■□□□□ 0.04
NCKAP1LP55160 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 AL031713.1-201ENST00000564813 661 ntBASIC15.27■□□□□ 0.04
NCKAP1LP55160 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 RPL17P45-201ENST00000586289 509 ntBASIC15.27■□□□□ 0.04
NCKAP1LP55160 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NCKAP1LP55160 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.27■□□□□ 0.04
NCKAP1LP55160 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NCKAP1LP55160 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NCKAP1LP55160 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NCKAP1LP55160 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NCKAP1LP55160 AC040160.2-201ENST00000623816 1675 ntBASIC15.27■□□□□ 0.03
NCKAP1LP55160 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NCKAP1LP55160 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NCKAP1LP55160 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NCKAP1LP55160 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NCKAP1LP55160 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NCKAP1LP55160 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NCKAP1LP55160 AC073548.1-201ENST00000624088 1882 ntBASIC15.27■□□□□ 0.03
NCKAP1LP55160 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NCKAP1LP55160 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 OR52M2P-201ENST00000414298 959 ntBASIC15.26■□□□□ 0.03
NCKAP1LP55160 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 PRSS3P1-201ENST00000503996 742 ntBASIC15.26■□□□□ 0.03
NCKAP1LP55160 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 AC007952.4-201ENST00000573866 637 ntBASIC15.26■□□□□ 0.03
NCKAP1LP55160 AC009474.1-201ENST00000455096 1565 ntBASIC15.26■□□□□ 0.03
NCKAP1LP55160 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 AC108024.1-201ENST00000626286 1721 ntBASIC15.26■□□□□ 0.03
NCKAP1LP55160 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.26■□□□□ 0.03
NCKAP1LP55160 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NCKAP1LP55160 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms