Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.53□□□□□ -0.4
CTSSP25774 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSSP25774 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTSSP25774 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.53□□□□□ -0.4
CTSSP25774 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSSP25774 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSSP25774 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.53□□□□□ -0.4
CTSSP25774 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTSSP25774 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTSSP25774 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTSSP25774 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
CTSSP25774 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTSSP25774 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CTSSP25774 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.52□□□□□ -0.4
CTSSP25774 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
CTSSP25774 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTSSP25774 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTSSP25774 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
CTSSP25774 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 MARK2P9-201ENST00000430958 1727 ntBASIC12.52□□□□□ -0.41
CTSSP25774 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CTSSP25774 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSSP25774 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.52□□□□□ -0.41
CTSSP25774 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.52□□□□□ -0.41
CTSSP25774 GRPEL2P1-201ENST00000453145 339 ntBASIC12.52□□□□□ -0.41
CTSSP25774 SLC25A15P3-201ENST00000505530 290 ntBASIC12.52□□□□□ -0.41
CTSSP25774 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.52□□□□□ -0.41
CTSSP25774 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.52□□□□□ -0.41
CTSSP25774 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CTSSP25774 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSSP25774 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.52□□□□□ -0.41
CTSSP25774 CR392039.2-201ENST00000623182 509 ntBASIC12.52□□□□□ -0.41
CTSSP25774 AC009084.3-201ENST00000623356 437 ntBASIC12.52□□□□□ -0.41
CTSSP25774 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.52□□□□□ -0.41
CTSSP25774 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CTSSP25774 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.52□□□□□ -0.41
CTSSP25774 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSSP25774 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CTSSP25774 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.52□□□□□ -0.41
CTSSP25774 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSSP25774 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSSP25774 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CTSSP25774 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.52□□□□□ -0.41
CTSSP25774 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSSP25774 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSSP25774 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.51□□□□□ -0.41
CTSSP25774 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
CTSSP25774 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.51□□□□□ -0.41
CTSSP25774 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
CTSSP25774 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.51□□□□□ -0.41
CTSSP25774 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CTSSP25774 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.51□□□□□ -0.41
CTSSP25774 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.51□□□□□ -0.41
CTSSP25774 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CTSSP25774 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 BAK1P1-201ENST00000317045 636 ntBASIC12.51□□□□□ -0.41
CTSSP25774 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CTSSP25774 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.51□□□□□ -0.41
CTSSP25774 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 HMGA1P1-201ENST00000415560 1062 ntBASIC12.51□□□□□ -0.41
CTSSP25774 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.51□□□□□ -0.41
CTSSP25774 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.51□□□□□ -0.41
CTSSP25774 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.51□□□□□ -0.41
CTSSP25774 PIN4P1-201ENST00000451079 396 ntBASIC12.51□□□□□ -0.41
CTSSP25774 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSSP25774 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CTSSP25774 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.51□□□□□ -0.41
CTSSP25774 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.51□□□□□ -0.41
CTSSP25774 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.51□□□□□ -0.41
CTSSP25774 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.51□□□□□ -0.41
CTSSP25774 AC007952.4-201ENST00000573866 637 ntBASIC12.51□□□□□ -0.41
CTSSP25774 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.51□□□□□ -0.41
CTSSP25774 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms