Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CHMP24386 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.2□□□□□ -0.3
CHMP24386 NDUFV2P1-201ENST00000596415 907 ntBASIC13.2□□□□□ -0.3
CHMP24386 AL132994.2-201ENST00000603120 687 ntBASIC13.2□□□□□ -0.3
CHMP24386 AC133540.1-201ENST00000620845 1019 ntBASIC13.2□□□□□ -0.3
CHMP24386 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.2□□□□□ -0.3
CHMP24386 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 AC144522.1-201ENST00000625111 1658 ntBASIC13.2□□□□□ -0.3
CHMP24386 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CHMP24386 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CHMP24386 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.2□□□□□ -0.3
CHMP24386 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
CHMP24386 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
CHMP24386 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
CHMP24386 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.2□□□□□ -0.3
CHMP24386 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.2□□□□□ -0.3
CHMP24386 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 FAM90A7P-201ENST00000382628 1395 ntBASIC13.2□□□□□ -0.3
CHMP24386 FAM90A23P-201ENST00000400136 1395 ntBASIC13.2□□□□□ -0.3
CHMP24386 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CHMP24386 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.19□□□□□ -0.3
CHMP24386 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 PCDHB18P-202ENST00000526308 3197 ntBASIC13.19□□□□□ -0.3
CHMP24386 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CHMP24386 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.19□□□□□ -0.3
CHMP24386 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 FNTAP2-201ENST00000430308 634 ntBASIC13.19□□□□□ -0.3
CHMP24386 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.19□□□□□ -0.3
CHMP24386 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.19□□□□□ -0.3
CHMP24386 AC022217.1-201ENST00000521069 738 ntBASIC13.19□□□□□ -0.3
CHMP24386 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.19□□□□□ -0.3
CHMP24386 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
CHMP24386 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.19□□□□□ -0.3
CHMP24386 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CHMP24386 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.19□□□□□ -0.3
CHMP24386 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.19□□□□□ -0.3
CHMP24386 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 AC004899.2-201ENST00000622993 3860 ntBASIC13.19□□□□□ -0.3
CHMP24386 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 AC009474.1-201ENST00000455096 1565 ntBASIC13.19□□□□□ -0.3
CHMP24386 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CHMP24386 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.19□□□□□ -0.3
CHMP24386 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHMP24386 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CHMP24386 TMBIM7P-202ENST00000641474 1516 ntBASIC13.18□□□□□ -0.3
CHMP24386 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.18□□□□□ -0.3
CHMP24386 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 TUBBP5-203ENST00000508529 1334 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms