Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.26■□□□□ 0.03
VTNP04004 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VTNP04004 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
VTNP04004 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.26■□□□□ 0.03
VTNP04004 AC067750.1-201ENST00000608826 6545 ntBASIC15.26■□□□□ 0.03
VTNP04004 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.25■□□□□ 0.03
VTNP04004 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VTNP04004 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VTNP04004 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.25■□□□□ 0.03
VTNP04004 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.25■□□□□ 0.03
VTNP04004 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 ABCD1P4-201ENST00000399687 604 ntBASIC15.25■□□□□ 0.03
VTNP04004 GGTLC4P-201ENST00000402176 664 ntBASIC15.25■□□□□ 0.03
VTNP04004 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC15.25■□□□□ 0.03
VTNP04004 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC15.25■□□□□ 0.03
VTNP04004 RN7SL494P-201ENST00000461517 304 ntBASIC15.25■□□□□ 0.03
VTNP04004 RN7SL582P-201ENST00000491078 279 ntBASIC15.25■□□□□ 0.03
VTNP04004 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC15.25■□□□□ 0.03
VTNP04004 GOLGA2P7-209ENST00000560408 745 ntBASIC15.25■□□□□ 0.03
VTNP04004 MT3-202ENST00000561640 514 ntTSL 3 BASIC15.25■□□□□ 0.03
VTNP04004 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC15.25■□□□□ 0.03
VTNP04004 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC15.25■□□□□ 0.03
VTNP04004 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
VTNP04004 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.25■□□□□ 0.03
VTNP04004 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.25■□□□□ 0.03
VTNP04004 Z98885.3-201ENST00000624882 1757 ntBASIC15.25■□□□□ 0.03
VTNP04004 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VTNP04004 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
VTNP04004 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC15.25■□□□□ 0.03
VTNP04004 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.25■□□□□ 0.03
VTNP04004 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.25■□□□□ 0.03
VTNP04004 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
VTNP04004 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.25■□□□□ 0.03
VTNP04004 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.25■□□□□ 0.03
VTNP04004 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 AL672207.1-201ENST00000328462 1570 ntBASIC15.24■□□□□ 0.03
VTNP04004 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
VTNP04004 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
VTNP04004 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC15.24■□□□□ 0.03
VTNP04004 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VTNP04004 AC073869.1-201ENST00000415574 2762 ntBASIC15.24■□□□□ 0.03
VTNP04004 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 AP000354.1-201ENST00000396982 456 ntBASIC15.24■□□□□ 0.03
VTNP04004 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC15.24■□□□□ 0.03
VTNP04004 LINP1-201ENST00000417112 917 ntTSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.24■□□□□ 0.03
VTNP04004 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
VTNP04004 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC15.24■□□□□ 0.03
VTNP04004 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.24■□□□□ 0.03
VTNP04004 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 DLK1-205ENST00000556051 469 ntTSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.24■□□□□ 0.03
VTNP04004 CES1P2-201ENST00000566467 1242 ntBASIC15.24■□□□□ 0.03
VTNP04004 AC011247.3-201ENST00000603297 438 ntBASIC15.24■□□□□ 0.03
VTNP04004 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.24■□□□□ 0.03
VTNP04004 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.24■□□□□ 0.03
VTNP04004 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms