Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC11.12□□□□□ -0.63
IFNA1P01562 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 DCLK3-203ENST00000636136 5446 ntTSL 5 BASIC11.12□□□□□ -0.63
IFNA1P01562 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
IFNA1P01562 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.12□□□□□ -0.63
IFNA1P01562 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.12□□□□□ -0.63
IFNA1P01562 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
IFNA1P01562 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC11.12□□□□□ -0.63
IFNA1P01562 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
IFNA1P01562 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
IFNA1P01562 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC11.11□□□□□ -0.63
IFNA1P01562 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC11.11□□□□□ -0.63
IFNA1P01562 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
IFNA1P01562 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 CAPN10-AS1-201ENST00000567819 4000 ntBASIC11.11□□□□□ -0.63
IFNA1P01562 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
IFNA1P01562 ZNF493-208ENST00000599461 1769 ntBASIC11.11□□□□□ -0.63
IFNA1P01562 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.11□□□□□ -0.63
IFNA1P01562 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
IFNA1P01562 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.11□□□□□ -0.63
IFNA1P01562 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
IFNA1P01562 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
IFNA1P01562 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.11□□□□□ -0.63
IFNA1P01562 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.11□□□□□ -0.63
IFNA1P01562 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.11□□□□□ -0.63
IFNA1P01562 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11.11□□□□□ -0.63
IFNA1P01562 SPDYE14P-201ENST00000442619 822 ntBASIC11.11□□□□□ -0.63
IFNA1P01562 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.11□□□□□ -0.63
IFNA1P01562 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC11.11□□□□□ -0.63
IFNA1P01562 FO681548.1-201ENST00000455617 1132 ntBASIC11.11□□□□□ -0.63
IFNA1P01562 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.11□□□□□ -0.63
IFNA1P01562 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC11.11□□□□□ -0.63
IFNA1P01562 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.11□□□□□ -0.63
IFNA1P01562 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.11□□□□□ -0.63
IFNA1P01562 AP001462.1-201ENST00000594089 452 ntBASIC11.11□□□□□ -0.63
IFNA1P01562 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC11.11□□□□□ -0.63
IFNA1P01562 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.11□□□□□ -0.63
IFNA1P01562 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
IFNA1P01562 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.11□□□□□ -0.63
IFNA1P01562 AC007431.3-201ENST00000623221 587 ntBASIC11.11□□□□□ -0.63
IFNA1P01562 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC11.11□□□□□ -0.63
IFNA1P01562 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC11.11□□□□□ -0.63
IFNA1P01562 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
IFNA1P01562 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IFNA1P01562 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC11.1□□□□□ -0.63
IFNA1P01562 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 AC092117.1-201ENST00000621230 3250 ntBASIC11.1□□□□□ -0.63
IFNA1P01562 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms