Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 AP001184.1-201ENST00000637936 376 ntBASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 CCT8L1P-201ENST00000465400 1674 ntBASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 AL591122.2-201ENST00000624125 1853 ntBASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 HLA-DMA-203ENST00000395305 777 ntBASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 HIST2H2BA-201ENST00000412169 381 ntBASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 RPL18AP3-201ENST00000462885 528 ntBASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 AC005618.3-201ENST00000624928 458 ntBASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA3F8WFD2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NPIPA3F8WFD2 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NPIPA3F8WFD2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NPIPA3F8WFD2 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms