Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 MIR6799-201ENST00000620297 69 ntBASIC12.59□□□□□ -0.39
LRRC28Q86X40 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 MSNP1-201ENST00000511640 1732 ntBASIC12.59□□□□□ -0.39
LRRC28Q86X40 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 AL138725.1-201ENST00000407347 1314 ntBASIC12.59□□□□□ -0.39
LRRC28Q86X40 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LRRC28Q86X40 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.58□□□□□ -0.39
LRRC28Q86X40 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LRRC28Q86X40 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LRRC28Q86X40 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LRRC28Q86X40 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 CNN2P10-201ENST00000443067 918 ntBASIC12.58□□□□□ -0.4
LRRC28Q86X40 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 TNRC18P1-201ENST00000502875 3650 ntBASIC12.58□□□□□ -0.4
LRRC28Q86X40 AL391280.1-201ENST00000506969 1062 ntBASIC12.58□□□□□ -0.4
LRRC28Q86X40 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 AC106820.3-201ENST00000561653 397 ntBASIC12.58□□□□□ -0.4
LRRC28Q86X40 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.58□□□□□ -0.4
LRRC28Q86X40 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 RN7SL713P-201ENST00000582127 302 ntBASIC12.58□□□□□ -0.4
LRRC28Q86X40 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 OR10B1P-201ENST00000601666 907 ntBASIC12.58□□□□□ -0.4
LRRC28Q86X40 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 PCDHB19P-202ENST00000625133 2914 ntBASIC12.58□□□□□ -0.4
LRRC28Q86X40 AL590440.2-201ENST00000641973 1595 ntBASIC12.58□□□□□ -0.4
LRRC28Q86X40 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 FKBP4P6-201ENST00000457486 1332 ntBASIC12.58□□□□□ -0.4
LRRC28Q86X40 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRRC28Q86X40 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.58□□□□□ -0.4
LRRC28Q86X40 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms