Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 B9D1-213ENST00000575403 928 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 LINC01128-201ENST00000415295 894 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 AQP7-207ENST00000447660 998 ntTSL 2 BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 AL391822.1-201ENST00000452580 562 ntBASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 CMTM1-206ENST00000457188 765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 SNORA74.2-201ENST00000516496 180 ntBASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 CMTM1-215ENST00000531885 590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 AP005121.2-201ENST00000583306 1101 ntBASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
ZFHX4Q86UP3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
ZFHX4Q86UP3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
ZFHX4Q86UP3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ZFHX4Q86UP3 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.65□□□□□ -0.39
ZFHX4Q86UP3 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.65□□□□□ -0.39
ZFHX4Q86UP3 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 MED20-204ENST00000409312 932 ntTSL 2 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 RPL10P12-201ENST00000427342 318 ntBASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 RPL29P2-202ENST00000498671 657 ntBASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 PROX1-AS1-205ENST00000598091 720 ntTSL 5 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 AC239859.5-201ENST00000614100 1232 ntBASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 IGHV3-60-201ENST00000521678 354 ntBASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 LINC00638-201ENST00000555578 2518 ntBASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 RPSAP61-201ENST00000412542 878 ntBASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 HLA-DQB3-203ENST00000425319 356 ntBASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 RPL13AP5-201ENST00000439189 612 ntBASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 RPL3P9-201ENST00000463217 1183 ntBASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 GH2-205ENST00000622506 702 ntTSL 5 BASIC12.64□□□□□ -0.39
ZFHX4Q86UP3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 ETV7-208ENST00000627426 1285 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 SNORD88B-201ENST00000408454 91 ntBASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 HAX1-211ENST00000532105 771 ntTSL 3 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 SNHG15-209ENST00000584686 541 ntTSL 3 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 AL157832.2-205ENST00000597245 1649 ntBASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.63□□□□□ -0.39
ZFHX4Q86UP3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms