Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.51□□□□□ -0.41
EFNB1P98172 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.51□□□□□ -0.41
EFNB1P98172 MIR3615-201ENST00000581999 87 ntBASIC12.51□□□□□ -0.41
EFNB1P98172 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.51□□□□□ -0.41
EFNB1P98172 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.51□□□□□ -0.41
EFNB1P98172 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 AC007336.3-201ENST00000623886 2160 ntBASIC12.51□□□□□ -0.41
EFNB1P98172 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
EFNB1P98172 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.51□□□□□ -0.41
EFNB1P98172 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.51□□□□□ -0.41
EFNB1P98172 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.5□□□□□ -0.41
EFNB1P98172 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.5□□□□□ -0.41
EFNB1P98172 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
EFNB1P98172 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
EFNB1P98172 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
EFNB1P98172 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.5□□□□□ -0.41
EFNB1P98172 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.5□□□□□ -0.41
EFNB1P98172 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
EFNB1P98172 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
EFNB1P98172 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.5□□□□□ -0.41
EFNB1P98172 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.5□□□□□ -0.41
EFNB1P98172 AC023310.1-201ENST00000554836 735 ntBASIC12.5□□□□□ -0.41
EFNB1P98172 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.5□□□□□ -0.41
EFNB1P98172 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.5□□□□□ -0.41
EFNB1P98172 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.5□□□□□ -0.41
EFNB1P98172 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.5□□□□□ -0.41
EFNB1P98172 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.5□□□□□ -0.41
EFNB1P98172 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.5□□□□□ -0.41
EFNB1P98172 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
EFNB1P98172 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
EFNB1P98172 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.5□□□□□ -0.41
EFNB1P98172 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 AC008132.1-202ENST00000342005 1389 ntBASIC12.5□□□□□ -0.41
EFNB1P98172 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.5□□□□□ -0.41
EFNB1P98172 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 NRADDP-202ENST00000641269 1585 ntBASIC12.5□□□□□ -0.41
EFNB1P98172 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
EFNB1P98172 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.5□□□□□ -0.41
EFNB1P98172 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
EFNB1P98172 AC104590.1-202ENST00000558368 1921 ntBASIC12.5□□□□□ -0.41
EFNB1P98172 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
EFNB1P98172 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 AC015819.3-201ENST00000624305 2674 ntBASIC12.5□□□□□ -0.41
EFNB1P98172 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
EFNB1P98172 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
EFNB1P98172 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB1P98172 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.49□□□□□ -0.41
EFNB1P98172 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.49□□□□□ -0.41
EFNB1P98172 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB1P98172 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.49□□□□□ -0.41
EFNB1P98172 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms