Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ALG3P1-201ENST00000508806 1114 ntBASIC12.61□□□□□ -0.39
VBP1P61758 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.61□□□□□ -0.39
VBP1P61758 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.61□□□□□ -0.39
VBP1P61758 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.61□□□□□ -0.39
VBP1P61758 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.61□□□□□ -0.39
VBP1P61758 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.61□□□□□ -0.39
VBP1P61758 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.61□□□□□ -0.39
VBP1P61758 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.61□□□□□ -0.39
VBP1P61758 AC004835.2-201ENST00000603762 682 ntBASIC12.61□□□□□ -0.39
VBP1P61758 AC007431.3-201ENST00000623221 587 ntBASIC12.61□□□□□ -0.39
VBP1P61758 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
VBP1P61758 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
VBP1P61758 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VBP1P61758 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.61□□□□□ -0.39
VBP1P61758 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
VBP1P61758 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.61□□□□□ -0.39
VBP1P61758 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.61□□□□□ -0.39
VBP1P61758 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
VBP1P61758 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.61□□□□□ -0.39
VBP1P61758 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.61□□□□□ -0.39
VBP1P61758 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.61□□□□□ -0.39
VBP1P61758 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.6□□□□□ -0.39
VBP1P61758 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.6□□□□□ -0.39
VBP1P61758 MARK2P16-201ENST00000605714 1723 ntBASIC12.6□□□□□ -0.39
VBP1P61758 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
VBP1P61758 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.6□□□□□ -0.39
VBP1P61758 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 AC004461.1-201ENST00000412461 403 ntBASIC12.6□□□□□ -0.39
VBP1P61758 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.6□□□□□ -0.39
VBP1P61758 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.6□□□□□ -0.39
VBP1P61758 AC036164.1-201ENST00000570544 333 ntBASIC12.6□□□□□ -0.39
VBP1P61758 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.6□□□□□ -0.39
VBP1P61758 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.6□□□□□ -0.39
VBP1P61758 AL513210.1-201ENST00000629608 234 ntBASIC12.6□□□□□ -0.39
VBP1P61758 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VBP1P61758 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 AC112176.1-201ENST00000565428 3024 ntBASIC12.6□□□□□ -0.39
VBP1P61758 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC12.6□□□□□ -0.39
VBP1P61758 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
VBP1P61758 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VBP1P61758 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC12.59□□□□□ -0.39
VBP1P61758 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.59□□□□□ -0.39
VBP1P61758 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
VBP1P61758 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC12.59□□□□□ -0.39
VBP1P61758 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms