Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CLDN6P56747 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CLDN6P56747 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN6P56747 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN6P56747 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.44□□□□□ -0.26
CLDN6P56747 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN6P56747 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN6P56747 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CLDN6P56747 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CLDN6P56747 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CLDN6P56747 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.44□□□□□ -0.26
CLDN6P56747 AF274858.1-201ENST00000406288 372 ntBASIC13.44□□□□□ -0.26
CLDN6P56747 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC13.44□□□□□ -0.26
CLDN6P56747 LINC00265-2P-201ENST00000413372 782 ntBASIC13.44□□□□□ -0.26
CLDN6P56747 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CLDN6P56747 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.44□□□□□ -0.26
CLDN6P56747 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN6P56747 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN6P56747 AC078814.4-201ENST00000546650 327 ntBASIC13.44□□□□□ -0.26
CLDN6P56747 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.44□□□□□ -0.26
CLDN6P56747 AL359219.1-201ENST00000556311 934 ntBASIC13.44□□□□□ -0.26
CLDN6P56747 AL590235.1-201ENST00000564650 861 ntBASIC13.44□□□□□ -0.26
CLDN6P56747 HNRNPA1P16-201ENST00000575692 955 ntBASIC13.44□□□□□ -0.26
CLDN6P56747 APOC1-209ENST00000592885 562 ntTSL 3 BASIC13.44□□□□□ -0.26
CLDN6P56747 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC13.44□□□□□ -0.26
CLDN6P56747 AC026336.4-201ENST00000624565 1050 ntBASIC13.44□□□□□ -0.26
CLDN6P56747 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC13.44□□□□□ -0.26
CLDN6P56747 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CLDN6P56747 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
CLDN6P56747 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.44□□□□□ -0.26
CLDN6P56747 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CLDN6P56747 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.44□□□□□ -0.26
CLDN6P56747 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN6P56747 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CLDN6P56747 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN6P56747 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
CLDN6P56747 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN6P56747 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CLDN6P56747 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CLDN6P56747 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CLDN6P56747 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN6P56747 FAM21EP-201ENST00000417804 985 ntBASIC13.43□□□□□ -0.26
CLDN6P56747 AC136604.1-202ENST00000425471 771 ntBASIC13.43□□□□□ -0.26
CLDN6P56747 AC027612.2-202ENST00000445955 1199 ntBASIC13.43□□□□□ -0.26
CLDN6P56747 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CLDN6P56747 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN6P56747 AC093300.1-201ENST00000510368 1201 ntBASIC13.43□□□□□ -0.26
CLDN6P56747 BAK1P2-201ENST00000532665 631 ntBASIC13.43□□□□□ -0.26
CLDN6P56747 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC13.43□□□□□ -0.26
CLDN6P56747 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC13.43□□□□□ -0.26
CLDN6P56747 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC13.43□□□□□ -0.26
CLDN6P56747 AC005274.1-201ENST00000623460 802 ntBASIC13.43□□□□□ -0.26
CLDN6P56747 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN6P56747 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN6P56747 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN6P56747 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
CLDN6P56747 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN6P56747 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms