Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
APOC4P55056 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
APOC4P55056 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
APOC4P55056 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
APOC4P55056 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC10.31□□□□□ -0.76
APOC4P55056 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
APOC4P55056 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 AL731571.1-201ENST00000617058 5428 ntBASIC10.3□□□□□ -0.76
APOC4P55056 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC10.3□□□□□ -0.76
APOC4P55056 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
APOC4P55056 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC10.3□□□□□ -0.76
APOC4P55056 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.3□□□□□ -0.76
APOC4P55056 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
APOC4P55056 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC10.3□□□□□ -0.76
APOC4P55056 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
APOC4P55056 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC10.3□□□□□ -0.76
APOC4P55056 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 IGF1-203ENST00000392904 761 ntTSL 5 BASIC10.3□□□□□ -0.76
APOC4P55056 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC10.3□□□□□ -0.76
APOC4P55056 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC10.3□□□□□ -0.76
APOC4P55056 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC10.3□□□□□ -0.76
APOC4P55056 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC10.3□□□□□ -0.76
APOC4P55056 RN7SL788P-201ENST00000460504 316 ntBASIC10.3□□□□□ -0.76
APOC4P55056 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
APOC4P55056 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC10.3□□□□□ -0.76
APOC4P55056 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC10.3□□□□□ -0.76
APOC4P55056 SNORD3B-1-201ENST00000577988 758 ntBASIC10.3□□□□□ -0.76
APOC4P55056 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC10.3□□□□□ -0.76
APOC4P55056 MIR4265-201ENST00000582152 99 ntBASIC10.3□□□□□ -0.76
APOC4P55056 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC10.3□□□□□ -0.76
APOC4P55056 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC10.3□□□□□ -0.76
APOC4P55056 KRT8P18-201ENST00000413425 1445 ntBASIC10.3□□□□□ -0.76
APOC4P55056 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
APOC4P55056 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
APOC4P55056 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 TBC1D27-202ENST00000424239 1573 ntBASIC10.3□□□□□ -0.76
APOC4P55056 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
APOC4P55056 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC10.3□□□□□ -0.76
APOC4P55056 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC10.3□□□□□ -0.76
APOC4P55056 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.3□□□□□ -0.76
APOC4P55056 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC10.3□□□□□ -0.76
APOC4P55056 AC061965.1-201ENST00000560524 1465 ntBASIC10.3□□□□□ -0.76
APOC4P55056 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOC4P55056 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC10.29□□□□□ -0.76
APOC4P55056 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
APOC4P55056 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
APOC4P55056 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOC4P55056 PHB-210ENST00000511832 1509 ntTSL 2 BASIC10.29□□□□□ -0.76
APOC4P55056 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms