Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.69■□□□□ 0.1
CASP1P29466 AL359881.2-201ENST00000602973 570 ntBASIC15.69■□□□□ 0.1
CASP1P29466 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP1P29466 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.69■□□□□ 0.1
CASP1P29466 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASP1P29466 SNORA50.1-201ENST00000628590 135 ntBASIC15.69■□□□□ 0.1
CASP1P29466 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASP1P29466 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP1P29466 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CASP1P29466 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP1P29466 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP1P29466 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP1P29466 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP1P29466 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CASP1P29466 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASP1P29466 AC009474.1-201ENST00000455096 1565 ntBASIC15.69■□□□□ 0.1
CASP1P29466 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP1P29466 AL355102.3-201ENST00000554299 1678 ntBASIC15.69■□□□□ 0.1
CASP1P29466 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP1P29466 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP1P29466 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP1P29466 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP1P29466 AC020917.4-201ENST00000623994 1999 ntBASIC15.69■□□□□ 0.1
CASP1P29466 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP1P29466 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASP1P29466 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP1P29466 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP1P29466 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASP1P29466 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP1P29466 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP1P29466 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.68■□□□□ 0.1
CASP1P29466 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASP1P29466 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC15.68■□□□□ 0.1
CASP1P29466 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CASP1P29466 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP1P29466 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP1P29466 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP1P29466 EGLN3-205ENST00000547327 2849 ntBASIC15.68■□□□□ 0.1
CASP1P29466 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC15.68■□□□□ 0.1
CASP1P29466 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
CASP1P29466 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP1P29466 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP1P29466 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP1P29466 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP1P29466 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.68■□□□□ 0.1
CASP1P29466 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.68■□□□□ 0.1
CASP1P29466 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CASP1P29466 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.68■□□□□ 0.1
CASP1P29466 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.68■□□□□ 0.1
CASP1P29466 DUX4L50-201ENST00000455245 715 ntBASIC15.68■□□□□ 0.1
CASP1P29466 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.68■□□□□ 0.1
CASP1P29466 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.68■□□□□ 0.1
CASP1P29466 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.68■□□□□ 0.1
CASP1P29466 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.68■□□□□ 0.1
CASP1P29466 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.68■□□□□ 0.1
CASP1P29466 RN7SL219P-201ENST00000582872 296 ntBASIC15.68■□□□□ 0.1
CASP1P29466 AL021707.6-201ENST00000609212 491 ntBASIC15.68■□□□□ 0.1
CASP1P29466 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
CASP1P29466 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP1P29466 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CASP1P29466 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.68■□□□□ 0.1
CASP1P29466 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP1P29466 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CASP1P29466 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC15.68■□□□□ 0.1
CASP1P29466 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CASP1P29466 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CASP1P29466 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC15.67■□□□□ 0.1
CASP1P29466 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP1P29466 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP1P29466 KRT8P43-201ENST00000406052 1458 ntBASIC15.67■□□□□ 0.1
CASP1P29466 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.67■□□□□ 0.1
CASP1P29466 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CASP1P29466 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASP1P29466 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP1P29466 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC15.67■□□□□ 0.1
CASP1P29466 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASP1P29466 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.67■□□□□ 0.1
CASP1P29466 FAM86MP-201ENST00000340703 885 ntBASIC15.67■□□□□ 0.1
CASP1P29466 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP1P29466 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASP1P29466 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CASP1P29466 ACTG1P2-201ENST00000415776 1125 ntBASIC15.67■□□□□ 0.1
CASP1P29466 ACTG1P11-201ENST00000425411 1125 ntBASIC15.67■□□□□ 0.1
CASP1P29466 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASP1P29466 AC004898.1-201ENST00000451057 766 ntBASIC15.67■□□□□ 0.1
CASP1P29466 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.67■□□□□ 0.1
CASP1P29466 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.67■□□□□ 0.1
CASP1P29466 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.67■□□□□ 0.1
CASP1P29466 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.67■□□□□ 0.1
CASP1P29466 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.67■□□□□ 0.1
CASP1P29466 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.67■□□□□ 0.1
CASP1P29466 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CASP1P29466 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASP1P29466 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CASP1P29466 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP1P29466 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP1P29466 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC15.67■□□□□ 0.1
CASP1P29466 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC15.67■□□□□ 0.1
CASP1P29466 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP1P29466 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms