Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.21□□□□□ -0.13
XPAP23025 SHMT1P1-201ENST00000419974 1312 ntBASIC14.21□□□□□ -0.13
XPAP23025 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.21□□□□□ -0.13
XPAP23025 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
XPAP23025 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.21□□□□□ -0.13
XPAP23025 AC091046.1-201ENST00000331871 207 ntBASIC14.21□□□□□ -0.13
XPAP23025 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.21□□□□□ -0.13
XPAP23025 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.21□□□□□ -0.13
XPAP23025 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.21□□□□□ -0.13
XPAP23025 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
XPAP23025 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
XPAP23025 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.21□□□□□ -0.13
XPAP23025 AC145285.5-201ENST00000562217 361 ntBASIC14.21□□□□□ -0.13
XPAP23025 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.21□□□□□ -0.13
XPAP23025 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.21□□□□□ -0.13
XPAP23025 AC009560.1-201ENST00000620208 434 ntBASIC14.21□□□□□ -0.13
XPAP23025 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
XPAP23025 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
XPAP23025 AC016397.2-201ENST00000624848 1985 ntBASIC14.21□□□□□ -0.13
XPAP23025 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC14.21□□□□□ -0.13
XPAP23025 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
XPAP23025 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
XPAP23025 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
XPAP23025 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
XPAP23025 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
XPAP23025 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
XPAP23025 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
XPAP23025 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
XPAP23025 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.21□□□□□ -0.14
XPAP23025 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.21□□□□□ -0.14
XPAP23025 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
XPAP23025 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.2□□□□□ -0.14
XPAP23025 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
XPAP23025 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.2□□□□□ -0.14
XPAP23025 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.2□□□□□ -0.14
XPAP23025 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
XPAP23025 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
XPAP23025 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 TMEM198B-204ENST00000484016 896 ntBASIC14.2□□□□□ -0.14
XPAP23025 RN7SL81P-201ENST00000493781 261 ntBASIC14.2□□□□□ -0.14
XPAP23025 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.2□□□□□ -0.14
XPAP23025 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.2□□□□□ -0.14
XPAP23025 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.2□□□□□ -0.14
XPAP23025 RN7SL665P-201ENST00000578793 300 ntBASIC14.2□□□□□ -0.14
XPAP23025 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC14.2□□□□□ -0.14
XPAP23025 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 AC027601.5-201ENST00000624065 2482 ntBASIC14.2□□□□□ -0.14
XPAP23025 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
XPAP23025 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.2□□□□□ -0.14
XPAP23025 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
XPAP23025 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XPAP23025 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC14.2□□□□□ -0.14
XPAP23025 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
XPAP23025 CICP16-201ENST00000502609 2813 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms