Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC15.02■□□□□ -0
SYN1P17600 AC005332.2-201ENST00000590010 930 ntBASIC15.02■□□□□ -0
SYN1P17600 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.02□□□□□ -0.01
SYN1P17600 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SYN1P17600 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SYN1P17600 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SYN1P17600 AC126177.1-201ENST00000547829 2218 ntBASIC15.02□□□□□ -0.01
SYN1P17600 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SYN1P17600 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SYN1P17600 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SYN1P17600 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SYN1P17600 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.02□□□□□ -0.01
SYN1P17600 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.02□□□□□ -0.01
SYN1P17600 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SYN1P17600 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SYN1P17600 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SYN1P17600 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SYN1P17600 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SYN1P17600 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SYN1P17600 PTN-202ENST00000393083 1599 ntTSL 5 BASIC15.02□□□□□ -0.01
SYN1P17600 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.02□□□□□ -0.01
SYN1P17600 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SYN1P17600 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SYN1P17600 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.01□□□□□ -0.01
SYN1P17600 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
SYN1P17600 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.01□□□□□ -0.01
SYN1P17600 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SYN1P17600 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
SYN1P17600 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
SYN1P17600 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 AL031590.1-202ENST00000641466 1737 ntBASIC15.01□□□□□ -0.01
SYN1P17600 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 AL590824.1-201ENST00000403828 1349 ntBASIC15.01□□□□□ -0.01
SYN1P17600 AC026271.1-201ENST00000447794 1348 ntBASIC15.01□□□□□ -0.01
SYN1P17600 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SYN1P17600 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
SYN1P17600 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.01□□□□□ -0.01
SYN1P17600 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.01□□□□□ -0.01
SYN1P17600 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SYN1P17600 HMGA1P1-201ENST00000415560 1062 ntBASIC15.01□□□□□ -0.01
SYN1P17600 RFNG-202ENST00000429557 994 ntTSL 5 BASIC15.01□□□□□ -0.01
SYN1P17600 AC005722.1-201ENST00000431878 964 ntBASIC15.01□□□□□ -0.01
SYN1P17600 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC15.01□□□□□ -0.01
SYN1P17600 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC15.01□□□□□ -0.01
SYN1P17600 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC15.01□□□□□ -0.01
SYN1P17600 AC104117.4-201ENST00000521486 847 ntBASIC15.01□□□□□ -0.01
SYN1P17600 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC15.01□□□□□ -0.01
SYN1P17600 HNRNPA1P72-201ENST00000529511 967 ntBASIC15.01□□□□□ -0.01
SYN1P17600 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
SYN1P17600 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC15.01□□□□□ -0.01
SYN1P17600 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC15.01□□□□□ -0.01
SYN1P17600 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC15.01□□□□□ -0.01
SYN1P17600 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.01□□□□□ -0.01
SYN1P17600 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.01□□□□□ -0.01
SYN1P17600 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC15.01□□□□□ -0.01
SYN1P17600 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SYN1P17600 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.01□□□□□ -0.01
SYN1P17600 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.01□□□□□ -0.01
SYN1P17600 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SYN1P17600 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYN1P17600 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.01□□□□□ -0.01
SYN1P17600 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.01□□□□□ -0.01
SYN1P17600 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYN1P17600 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC15□□□□□ -0.01
SYN1P17600 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15□□□□□ -0.01
SYN1P17600 AC011498.7-201ENST00000624986 2027 ntBASIC15□□□□□ -0.01
SYN1P17600 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYN1P17600 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SYN1P17600 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SYN1P17600 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15□□□□□ -0.01
SYN1P17600 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYN1P17600 AC067930.6-201ENST00000623257 4947 ntBASIC15□□□□□ -0.01
SYN1P17600 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15□□□□□ -0.01
SYN1P17600 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SYN1P17600 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYN1P17600 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15□□□□□ -0.01
SYN1P17600 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC15□□□□□ -0.01
SYN1P17600 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC15□□□□□ -0.01
SYN1P17600 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC15□□□□□ -0.01
SYN1P17600 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC15□□□□□ -0.01
SYN1P17600 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC15□□□□□ -0.01
SYN1P17600 NDUFB2P1-201ENST00000506966 295 ntBASIC15□□□□□ -0.01
SYN1P17600 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC15□□□□□ -0.01
SYN1P17600 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC15□□□□□ -0.01
SYN1P17600 AL078624.1-201ENST00000604004 547 ntBASIC15□□□□□ -0.01
SYN1P17600 AL109954.3-201ENST00000615088 558 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms