Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC10.41□□□□□ -0.74
NACAE9PAV3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC10.41□□□□□ -0.74
NACAE9PAV3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
NACAE9PAV3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC10.41□□□□□ -0.74
NACAE9PAV3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC10.41□□□□□ -0.74
NACAE9PAV3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC10.41□□□□□ -0.74
NACAE9PAV3 ACTG1P17-201ENST00000558391 1119 ntBASIC10.41□□□□□ -0.74
NACAE9PAV3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
NACAE9PAV3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC10.41□□□□□ -0.74
NACAE9PAV3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
NACAE9PAV3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
NACAE9PAV3 KC6-205ENST00000599934 556 ntTSL 4 BASIC10.41□□□□□ -0.74
NACAE9PAV3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC10.41□□□□□ -0.74
NACAE9PAV3 AL096828.3-201ENST00000615354 462 ntBASIC10.41□□□□□ -0.74
NACAE9PAV3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC10.41□□□□□ -0.74
NACAE9PAV3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC10.41□□□□□ -0.74
NACAE9PAV3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
NACAE9PAV3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
NACAE9PAV3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC10.41□□□□□ -0.74
NACAE9PAV3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.41□□□□□ -0.74
NACAE9PAV3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC10.41□□□□□ -0.74
NACAE9PAV3 AC105206.1-202ENST00000314927 2368 ntBASIC10.41□□□□□ -0.74
NACAE9PAV3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC10.41□□□□□ -0.74
NACAE9PAV3 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
NACAE9PAV3 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
NACAE9PAV3 TNXB-201ENST00000375244 13132 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
NACAE9PAV3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
NACAE9PAV3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC10.41□□□□□ -0.74
NACAE9PAV3 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
NACAE9PAV3 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
NACAE9PAV3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
NACAE9PAV3 CICP17-201ENST00000418553 2377 ntBASIC10.4□□□□□ -0.74
NACAE9PAV3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC10.4□□□□□ -0.74
NACAE9PAV3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 USP17L6P-201ENST00000382470 1197 ntBASIC10.4□□□□□ -0.74
NACAE9PAV3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC10.4□□□□□ -0.74
NACAE9PAV3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC10.4□□□□□ -0.74
NACAE9PAV3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC10.4□□□□□ -0.74
NACAE9PAV3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
NACAE9PAV3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
NACAE9PAV3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
NACAE9PAV3 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC10.4□□□□□ -0.74
NACAE9PAV3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC10.4□□□□□ -0.74
NACAE9PAV3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC10.4□□□□□ -0.74
NACAE9PAV3 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
NACAE9PAV3 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
NACAE9PAV3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 KRT8P4-201ENST00000509735 1454 ntBASIC10.4□□□□□ -0.74
NACAE9PAV3 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
NACAE9PAV3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
NACAE9PAV3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
NACAE9PAV3 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
NACAE9PAV3 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
NACAE9PAV3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
NACAE9PAV3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
NACAE9PAV3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC10.4□□□□□ -0.75
NACAE9PAV3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
NACAE9PAV3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
NACAE9PAV3 CD8B2-202ENST00000417670 633 ntBASIC10.4□□□□□ -0.75
NACAE9PAV3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC10.4□□□□□ -0.75
NACAE9PAV3 HIST2H2BB-201ENST00000449108 381 ntBASIC10.4□□□□□ -0.75
NACAE9PAV3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC10.4□□□□□ -0.75
NACAE9PAV3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC10.4□□□□□ -0.75
NACAE9PAV3 AP006547.1-201ENST00000563435 692 ntBASIC10.4□□□□□ -0.75
NACAE9PAV3 RN7SL48P-201ENST00000579283 293 ntBASIC10.4□□□□□ -0.75
NACAE9PAV3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
NACAE9PAV3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC10.4□□□□□ -0.75
NACAE9PAV3 AGAP10P-201ENST00000454844 2418 ntBASIC10.4□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms