Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC66A2RUB6 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC66A2RUB6 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC66A2RUB6 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 AC106820.3-201ENST00000561653 397 ntBASIC15.34■□□□□ 0.05
CCDC66A2RUB6 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 PER1-211ENST00000581082 4521 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 AC125807.2-201ENST00000513358 3514 ntBASIC15.34■□□□□ 0.05
CCDC66A2RUB6 UBTFL8-201ENST00000426903 2112 ntBASIC15.34■□□□□ 0.05
CCDC66A2RUB6 AC009093.10-201ENST00000641956 1442 ntBASIC15.34■□□□□ 0.05
CCDC66A2RUB6 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC66A2RUB6 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC66A2RUB6 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
CCDC66A2RUB6 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CCDC66A2RUB6 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC66A2RUB6 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC66A2RUB6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.33■□□□□ 0.05
CCDC66A2RUB6 AL157996.1-201ENST00000624684 2299 ntBASIC15.33■□□□□ 0.05
CCDC66A2RUB6 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC66A2RUB6 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC66A2RUB6 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC66A2RUB6 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CCDC66A2RUB6 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC66A2RUB6 C2-209ENST00000452323 1999 ntTSL 2 BASIC15.33■□□□□ 0.05
CCDC66A2RUB6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 TPM3P8-201ENST00000330554 643 ntBASIC15.33■□□□□ 0.04
CCDC66A2RUB6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 AC190387.1-201ENST00000551683 408 ntBASIC15.33■□□□□ 0.04
CCDC66A2RUB6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 AC005586.2-201ENST00000563946 837 ntBASIC15.33■□□□□ 0.04
CCDC66A2RUB6 MIR5189-201ENST00000577370 114 ntBASIC15.33■□□□□ 0.04
CCDC66A2RUB6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 AC132938.4-201ENST00000623835 848 ntBASIC15.33■□□□□ 0.04
CCDC66A2RUB6 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CCDC66A2RUB6 NCLP1-201ENST00000445357 1963 ntBASIC15.33■□□□□ 0.04
CCDC66A2RUB6 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms