Protein–RNA interactions for Protein: Q9HCJ0

TNRC6C, Trinucleotide repeat-containing gene 6C protein, humanhuman

Known RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6CQ9HCJ0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 SFPQP1-201ENST00000446621 1786 ntBASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 AL157832.2-205ENST00000597245 1649 ntBASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 MIR193A-201ENST00000384882 88 ntBASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 DUX4L31-201ENST00000446466 1136 ntBASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 AC069421.1-201ENST00000447462 323 ntBASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 RNF7-205ENST00000480908 782 ntTSL 4 BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC6CQ9HCJ0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 AL031590.1-202ENST00000641466 1737 ntBASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 PPP1R2P10-201ENST00000393023 595 ntBASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 AC113398.1-201ENST00000464124 406 ntBASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 RN7SL202P-201ENST00000584410 262 ntBASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 AC148476.1-201ENST00000622182 705 ntBASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TNRC6CQ9HCJ0 ZSCAN5DP-201ENST00000600684 1488 ntBASIC16.71■□□□□ 0.26
TNRC6CQ9HCJ0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TNRC6CQ9HCJ0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TNRC6CQ9HCJ0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 RPSAP16-201ENST00000447583 821 ntBASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 AL450346.2-201ENST00000495602 1024 ntBASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 AL031768.1-201ENST00000606542 701 ntBASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 MDC1-209ENST00000613547 830 ntTSL 5 BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 MARK2P9-201ENST00000430958 1727 ntBASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC6CQ9HCJ0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms