Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 CR383656.2-201ENST00000548656 2254 ntBASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 AC004923.1-202ENST00000642106 209 ntBASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 FMO6P-201ENST00000236166 1620 ntBASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 AL591846.1-201ENST00000451736 433 ntBASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 SNORD3B-2-202ENST00000571722 791 ntBASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 AL157813.1-201ENST00000612996 587 ntBASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 BRD7P5-201ENST00000299197 1822 ntBASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPF3BQ9BZI7 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms