Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 SLC25A15P3-201ENST00000505530 290 ntBASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 AC021305.1-201ENST00000520656 1514 ntBASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 AC019109.1-201ENST00000401725 1874 ntBASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHKBP1Q8TBC3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 AC090505.1-201ENST00000430515 1834 ntBASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 AC103592.1-201ENST00000394513 664 ntBASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 RN7SL396P-201ENST00000471086 295 ntBASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 REEP5-205ENST00000504247 480 ntTSL 5 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 IGHV1-12-201ENST00000518307 205 ntBASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 C2orf69P1-201ENST00000563532 1093 ntBASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 SNORD3B-1-201ENST00000577988 758 ntBASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 MIR4472-1-201ENST00000584349 80 ntBASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 AP005264.5-201ENST00000590066 467 ntBASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 RPL13AP3-202ENST00000494676 1473 ntBASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 ODCP-201ENST00000459650 1639 ntBASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 AL022313.4-201ENST00000562756 2046 ntBASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.73□□□□□ -0.05
SHKBP1Q8TBC3 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 CICP16-201ENST00000502609 2813 ntBASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms