Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 CICP12-201ENST00000455801 843 ntBASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 SRP14-204ENST00000558720 780 ntTSL 2 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 AC019109.1-201ENST00000401725 1874 ntBASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 CISD2-202ENST00000503643 808 ntTSL 2 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 FUCA1P1-201ENST00000374476 1351 ntBASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 RNVU1-8-201ENST00000364272 125 ntBASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 GUSBP10-201ENST00000417412 665 ntBASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 KRT18P4-201ENST00000422599 1288 ntBASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 GNG10P1-201ENST00000452289 199 ntBASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 AC006116.2-201ENST00000589958 988 ntBASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 AL118522.1-201ENST00000611368 560 ntBASIC12.79□□□□□ -0.36
RP1L1Q8IWN7 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms