Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 KRT18P15-201ENST00000458108 1291 ntBASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 API5-211ENST00000534695 560 ntTSL 5 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 AC092552.1-201ENST00000547243 906 ntBASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 CLUHP6-201ENST00000580789 941 ntBASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 TMEM261P1-201ENST00000604899 340 ntBASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 CSPG4P11-201ENST00000560634 4910 ntBASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
ANKRD55Q3KP44 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 AC012531.1-201ENST00000562848 2680 ntBASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 KRT17P7-201ENST00000451704 1104 ntBASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 AP001063.1-201ENST00000568332 529 ntBASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 AC133539.2-201ENST00000604757 467 ntBASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 AC025048.6-201ENST00000634326 1161 ntBASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ANKRD55Q3KP44 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 225.2 ms