Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSBP1Q04837 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.91□□□□□ -0.5
SSBP1Q04837 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SSBP1Q04837 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SSBP1Q04837 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSBP1Q04837 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SSBP1Q04837 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSBP1Q04837 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSBP1Q04837 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSBP1Q04837 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SSBP1Q04837 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SSBP1Q04837 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.91□□□□□ -0.5
SSBP1Q04837 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SSBP1Q04837 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.9□□□□□ -0.5
SSBP1Q04837 AL008718.2-201ENST00000609206 1313 ntBASIC11.9□□□□□ -0.5
SSBP1Q04837 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SSBP1Q04837 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC11.9□□□□□ -0.5
SSBP1Q04837 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 CICP9-201ENST00000444451 1913 ntBASIC11.9□□□□□ -0.5
SSBP1Q04837 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SSBP1Q04837 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11.9□□□□□ -0.5
SSBP1Q04837 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.9□□□□□ -0.5
SSBP1Q04837 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.9□□□□□ -0.5
SSBP1Q04837 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.9□□□□□ -0.5
SSBP1Q04837 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.9□□□□□ -0.5
SSBP1Q04837 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
SSBP1Q04837 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 AL136309.1-201ENST00000403917 691 ntBASIC11.9□□□□□ -0.5
SSBP1Q04837 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 HNRNPA1P2-207ENST00000432375 960 ntBASIC11.9□□□□□ -0.5
SSBP1Q04837 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.9□□□□□ -0.5
SSBP1Q04837 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.9□□□□□ -0.5
SSBP1Q04837 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.9□□□□□ -0.5
SSBP1Q04837 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SSBP1Q04837 AC123567.1-201ENST00000548294 1261 ntBASIC11.9□□□□□ -0.5
SSBP1Q04837 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SSBP1Q04837 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC11.9□□□□□ -0.5
SSBP1Q04837 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SSBP1Q04837 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.9□□□□□ -0.5
SSBP1Q04837 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.9□□□□□ -0.5
SSBP1Q04837 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.9□□□□□ -0.5
SSBP1Q04837 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.9□□□□□ -0.5
SSBP1Q04837 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 AL139424.3-202ENST00000641619 917 ntBASIC11.9□□□□□ -0.5
SSBP1Q04837 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 AC102953.2-201ENST00000609755 3026 ntBASIC11.9□□□□□ -0.5
SSBP1Q04837 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 AC093462.1-201ENST00000621167 1683 ntBASIC11.9□□□□□ -0.5
SSBP1Q04837 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.9□□□□□ -0.5
SSBP1Q04837 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.9□□□□□ -0.5
SSBP1Q04837 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SSBP1Q04837 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SSBP1Q04837 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SSBP1Q04837 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
SSBP1Q04837 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
SSBP1Q04837 USB1-207ENST00000563149 1751 ntTSL 2 BASIC11.9□□□□□ -0.51
SSBP1Q04837 AMT-256ENST00000638063 1783 ntTSL 5 BASIC11.9□□□□□ -0.51
SSBP1Q04837 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SSBP1Q04837 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
SSBP1Q04837 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SSBP1Q04837 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC11.89□□□□□ -0.51
SSBP1Q04837 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSBP1Q04837 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSBP1Q04837 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC11.89□□□□□ -0.51
SSBP1Q04837 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.89□□□□□ -0.51
SSBP1Q04837 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.89□□□□□ -0.51
SSBP1Q04837 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSBP1Q04837 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SSBP1Q04837 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SSBP1Q04837 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC11.89□□□□□ -0.51
SSBP1Q04837 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.89□□□□□ -0.51
SSBP1Q04837 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSBP1Q04837 DUT-208ENST00000559540 1441 ntTSL 2 BASIC11.89□□□□□ -0.51
SSBP1Q04837 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC11.89□□□□□ -0.51
SSBP1Q04837 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SSBP1Q04837 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC11.89□□□□□ -0.51
SSBP1Q04837 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SSBP1Q04837 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.89□□□□□ -0.51
SSBP1Q04837 EIF4HP1-201ENST00000453115 687 ntBASIC11.89□□□□□ -0.51
SSBP1Q04837 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.89□□□□□ -0.51
SSBP1Q04837 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.89□□□□□ -0.51
SSBP1Q04837 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms