Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.69□□□□□ -0.38
CDK5Q00535 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CDK5Q00535 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.69□□□□□ -0.38
CDK5Q00535 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.69□□□□□ -0.38
CDK5Q00535 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.69□□□□□ -0.38
CDK5Q00535 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.69□□□□□ -0.38
CDK5Q00535 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CDK5Q00535 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CDK5Q00535 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.69□□□□□ -0.38
CDK5Q00535 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.69□□□□□ -0.38
CDK5Q00535 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.69□□□□□ -0.38
CDK5Q00535 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.69□□□□□ -0.38
CDK5Q00535 AC027796.2-201ENST00000575326 344 ntBASIC12.69□□□□□ -0.38
CDK5Q00535 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.69□□□□□ -0.38
CDK5Q00535 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.69□□□□□ -0.38
CDK5Q00535 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
CDK5Q00535 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.69□□□□□ -0.38
CDK5Q00535 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.69□□□□□ -0.38
CDK5Q00535 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.68□□□□□ -0.38
CDK5Q00535 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.68□□□□□ -0.38
CDK5Q00535 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
CDK5Q00535 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CDK5Q00535 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.68□□□□□ -0.38
CDK5Q00535 AL023775.1-201ENST00000454907 1746 ntBASIC12.68□□□□□ -0.38
CDK5Q00535 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CDK5Q00535 AC018629.1-201ENST00000623381 1736 ntBASIC12.68□□□□□ -0.38
CDK5Q00535 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.68□□□□□ -0.38
CDK5Q00535 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.68□□□□□ -0.38
CDK5Q00535 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.68□□□□□ -0.38
CDK5Q00535 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
CDK5Q00535 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 TUBB2BP1-201ENST00000404155 871 ntBASIC12.68□□□□□ -0.38
CDK5Q00535 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.68□□□□□ -0.38
CDK5Q00535 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.68□□□□□ -0.38
CDK5Q00535 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CDK5Q00535 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.68□□□□□ -0.38
CDK5Q00535 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.68□□□□□ -0.38
CDK5Q00535 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.68□□□□□ -0.38
CDK5Q00535 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.68□□□□□ -0.38
CDK5Q00535 AP000812.2-201ENST00000538934 718 ntBASIC12.68□□□□□ -0.38
CDK5Q00535 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 CR383656.12-201ENST00000549567 513 ntBASIC12.68□□□□□ -0.38
CDK5Q00535 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.68□□□□□ -0.38
CDK5Q00535 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.68□□□□□ -0.38
CDK5Q00535 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.68□□□□□ -0.38
CDK5Q00535 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.68□□□□□ -0.38
CDK5Q00535 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.68□□□□□ -0.38
CDK5Q00535 AL356740.1-201ENST00000602192 1297 ntBASIC12.68□□□□□ -0.38
CDK5Q00535 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CDK5Q00535 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CDK5Q00535 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.68□□□□□ -0.38
CDK5Q00535 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CDK5Q00535 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.68□□□□□ -0.38
CDK5Q00535 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDK5Q00535 AC102953.2-201ENST00000609755 3026 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms