Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.39□□□□□ -0.27
SKP1P63208 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SKP1P63208 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.39□□□□□ -0.27
SKP1P63208 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.39□□□□□ -0.27
SKP1P63208 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.39□□□□□ -0.27
SKP1P63208 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.39□□□□□ -0.27
SKP1P63208 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.39□□□□□ -0.27
SKP1P63208 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.39□□□□□ -0.27
SKP1P63208 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 MIR645-201ENST00000385283 94 ntBASIC13.39□□□□□ -0.27
SKP1P63208 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.39□□□□□ -0.27
SKP1P63208 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.39□□□□□ -0.27
SKP1P63208 AL807761.2-201ENST00000422849 729 ntBASIC13.39□□□□□ -0.27
SKP1P63208 PPP1R2P4-201ENST00000424051 595 ntBASIC13.39□□□□□ -0.27
SKP1P63208 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.39□□□□□ -0.27
SKP1P63208 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 AC005740.1-201ENST00000515639 522 ntBASIC13.39□□□□□ -0.27
SKP1P63208 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.39□□□□□ -0.27
SKP1P63208 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.39□□□□□ -0.27
SKP1P63208 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 AC106872.11-201ENST00000605838 421 ntBASIC13.39□□□□□ -0.27
SKP1P63208 AL353726.2-201ENST00000623259 884 ntBASIC13.39□□□□□ -0.27
SKP1P63208 AL139424.3-202ENST00000641619 917 ntBASIC13.39□□□□□ -0.27
SKP1P63208 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.39□□□□□ -0.27
SKP1P63208 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SKP1P63208 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.39□□□□□ -0.27
SKP1P63208 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SKP1P63208 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SKP1P63208 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SKP1P63208 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SKP1P63208 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.38□□□□□ -0.27
SKP1P63208 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 LINC01230-201ENST00000625222 3017 ntBASIC13.38□□□□□ -0.27
SKP1P63208 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
SKP1P63208 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.38□□□□□ -0.27
SKP1P63208 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SKP1P63208 MIR557-201ENST00000385239 98 ntBASIC13.38□□□□□ -0.27
SKP1P63208 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.38□□□□□ -0.27
SKP1P63208 RPL8P2-201ENST00000430538 502 ntBASIC13.38□□□□□ -0.27
SKP1P63208 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.38□□□□□ -0.27
SKP1P63208 IGLV3-15-201ENST00000518356 244 ntBASIC13.38□□□□□ -0.27
SKP1P63208 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.38□□□□□ -0.27
SKP1P63208 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.38□□□□□ -0.27
SKP1P63208 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.38□□□□□ -0.27
SKP1P63208 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.38□□□□□ -0.27
SKP1P63208 AL021707.6-201ENST00000609212 491 ntBASIC13.38□□□□□ -0.27
SKP1P63208 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.38□□□□□ -0.27
SKP1P63208 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.38□□□□□ -0.27
SKP1P63208 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SKP1P63208 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.38□□□□□ -0.27
SKP1P63208 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.38□□□□□ -0.27
SKP1P63208 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.38□□□□□ -0.27
SKP1P63208 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms