Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
KNTC1P50748 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 PMEL-214ENST00000550447 901 ntTSL 3 BASIC13.32□□□□□ -0.28
KNTC1P50748 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 AL049840.2-201ENST00000602722 535 ntBASIC13.32□□□□□ -0.28
KNTC1P50748 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.32□□□□□ -0.28
KNTC1P50748 WASH7P-201ENST00000488147 1351 ntBASIC13.32□□□□□ -0.28
KNTC1P50748 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 TBC1D27-202ENST00000424239 1573 ntBASIC13.32□□□□□ -0.28
KNTC1P50748 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 FAM197Y6-201ENST00000420524 766 ntBASIC13.32□□□□□ -0.28
KNTC1P50748 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
KNTC1P50748 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 AC025186.1-201ENST00000478174 870 ntBASIC13.32□□□□□ -0.28
KNTC1P50748 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.32□□□□□ -0.28
KNTC1P50748 AC120498.7-201ENST00000562876 330 ntBASIC13.32□□□□□ -0.28
KNTC1P50748 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.32□□□□□ -0.28
KNTC1P50748 RN7SL605P-201ENST00000577229 281 ntBASIC13.32□□□□□ -0.28
KNTC1P50748 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 AC026120.2-201ENST00000617239 309 ntBASIC13.32□□□□□ -0.28
KNTC1P50748 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC13.32□□□□□ -0.28
KNTC1P50748 AL357143.1-203ENST00000639750 881 ntBASIC13.32□□□□□ -0.28
KNTC1P50748 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.32□□□□□ -0.28
KNTC1P50748 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
KNTC1P50748 AC103702.1-201ENST00000548801 2630 ntBASIC13.32□□□□□ -0.28
KNTC1P50748 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 AC097376.2-205ENST00000610159 5334 ntBASIC13.31□□□□□ -0.28
KNTC1P50748 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.31□□□□□ -0.28
KNTC1P50748 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
KNTC1P50748 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 EEF1DP5-201ENST00000431410 772 ntBASIC13.31□□□□□ -0.28
KNTC1P50748 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.31□□□□□ -0.28
KNTC1P50748 TPT1P6-201ENST00000458298 514 ntBASIC13.31□□□□□ -0.28
KNTC1P50748 DPY19L2P4-201ENST00000479881 442 ntBASIC13.31□□□□□ -0.28
KNTC1P50748 AC093700.1-201ENST00000503348 717 ntBASIC13.31□□□□□ -0.28
KNTC1P50748 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC13.31□□□□□ -0.28
KNTC1P50748 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC13.31□□□□□ -0.28
KNTC1P50748 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.31□□□□□ -0.28
KNTC1P50748 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
KNTC1P50748 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
KNTC1P50748 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.31□□□□□ -0.28
KNTC1P50748 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.31□□□□□ -0.28
KNTC1P50748 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
KNTC1P50748 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
KNTC1P50748 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.31□□□□□ -0.28
KNTC1P50748 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
KNTC1P50748 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.31□□□□□ -0.28
KNTC1P50748 AL354702.1-201ENST00000442006 1960 ntBASIC13.31□□□□□ -0.28
KNTC1P50748 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KNTC1P50748 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.31□□□□□ -0.28
KNTC1P50748 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC13.31□□□□□ -0.28
KNTC1P50748 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
KNTC1P50748 AC011431.1-201ENST00000512971 230 ntBASIC13.31□□□□□ -0.28
KNTC1P50748 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.31□□□□□ -0.28
KNTC1P50748 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.31□□□□□ -0.28
KNTC1P50748 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms