Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPS1P31327 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPS1P31327 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPS1P31327 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CPS1P31327 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC19.14■□□□□ 0.65
CPS1P31327 AC002350.2-201ENST00000623894 1828 ntBASIC19.14■□□□□ 0.65
CPS1P31327 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPS1P31327 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC19.14■□□□□ 0.65
CPS1P31327 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC19.14■□□□□ 0.65
CPS1P31327 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPS1P31327 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC19.14■□□□□ 0.65
CPS1P31327 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.14■□□□□ 0.65
CPS1P31327 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPS1P31327 HNRNPA1P68-201ENST00000425806 979 ntBASIC19.14■□□□□ 0.65
CPS1P31327 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC19.14■□□□□ 0.65
CPS1P31327 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC19.14■□□□□ 0.65
CPS1P31327 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPS1P31327 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CPS1P31327 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC19.14■□□□□ 0.65
CPS1P31327 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC19.14■□□□□ 0.65
CPS1P31327 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC19.14■□□□□ 0.65
CPS1P31327 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC19.14■□□□□ 0.65
CPS1P31327 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPS1P31327 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC19.14■□□□□ 0.65
CPS1P31327 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC19.14■□□□□ 0.65
CPS1P31327 AC112702.1-201ENST00000623712 366 ntBASIC19.14■□□□□ 0.65
CPS1P31327 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPS1P31327 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPS1P31327 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPS1P31327 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPS1P31327 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC19.14■□□□□ 0.65
CPS1P31327 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPS1P31327 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPS1P31327 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPS1P31327 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.13■□□□□ 0.65
CPS1P31327 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPS1P31327 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CPS1P31327 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CPS1P31327 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CPS1P31327 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
CPS1P31327 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPS1P31327 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPS1P31327 RN7SL76P-201ENST00000482435 289 ntBASIC19.13■□□□□ 0.65
CPS1P31327 CAP2-207ENST00000493172 861 ntTSL 2 BASIC19.13■□□□□ 0.65
CPS1P31327 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC19.13■□□□□ 0.65
CPS1P31327 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC19.13■□□□□ 0.65
CPS1P31327 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC19.13■□□□□ 0.65
CPS1P31327 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC19.13■□□□□ 0.65
CPS1P31327 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC19.13■□□□□ 0.65
CPS1P31327 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC19.13■□□□□ 0.65
CPS1P31327 AL133551.1-201ENST00000610279 1222 ntBASIC19.13■□□□□ 0.65
CPS1P31327 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPS1P31327 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC19.13■□□□□ 0.65
CPS1P31327 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPS1P31327 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPS1P31327 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CPS1P31327 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPS1P31327 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPS1P31327 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CPS1P31327 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPS1P31327 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPS1P31327 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPS1P31327 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPS1P31327 AC061965.1-201ENST00000560524 1465 ntBASIC19.12■□□□□ 0.65
CPS1P31327 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CPS1P31327 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC19.12■□□□□ 0.65
CPS1P31327 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPS1P31327 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPS1P31327 MARCKSL1P2-201ENST00000401037 976 ntBASIC19.12■□□□□ 0.65
CPS1P31327 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC19.12■□□□□ 0.65
CPS1P31327 IGHV1OR16-3-201ENST00000568138 205 ntBASIC19.12■□□□□ 0.65
CPS1P31327 NAA38-204ENST00000575208 529 ntTSL 3 BASIC19.12■□□□□ 0.65
CPS1P31327 RN7SL5P-201ENST00000581458 321 ntBASIC19.12■□□□□ 0.65
CPS1P31327 MIR4526-201ENST00000583168 87 ntBASIC19.12■□□□□ 0.65
CPS1P31327 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC19.12■□□□□ 0.65
CPS1P31327 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC19.12■□□□□ 0.65
CPS1P31327 MDC1-209ENST00000613547 830 ntTSL 5 BASIC19.12■□□□□ 0.65
CPS1P31327 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC19.12■□□□□ 0.65
CPS1P31327 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPS1P31327 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPS1P31327 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPS1P31327 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPS1P31327 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPS1P31327 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPS1P31327 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC19.12■□□□□ 0.65
CPS1P31327 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CPS1P31327 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CPS1P31327 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC19.12■□□□□ 0.65
CPS1P31327 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC19.11■□□□□ 0.65
CPS1P31327 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CPS1P31327 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CPS1P31327 RNF7-202ENST00000393000 805 ntTSL 2 BASIC19.11■□□□□ 0.65
CPS1P31327 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC19.11■□□□□ 0.65
CPS1P31327 MRPS16P3-201ENST00000415961 374 ntBASIC19.11■□□□□ 0.65
CPS1P31327 FPGT-205ENST00000482102 561 ntTSL 4 BASIC19.11■□□□□ 0.65
CPS1P31327 AC098591.1-202ENST00000507914 937 ntBASIC19.11■□□□□ 0.65
CPS1P31327 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC19.11■□□□□ 0.65
CPS1P31327 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPS1P31327 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms