Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATP2B1P20020 AC015909.5-201ENST00000624336 2266 ntBASIC16.29■□□□□ 0.2
ATP2B1P20020 CROT-203ENST00000419147 2959 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP2B1P20020 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 TET3-201ENST00000305799 5174 ntTSL 5 BASIC16.29■□□□□ 0.2
ATP2B1P20020 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ATP2B1P20020 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATP2B1P20020 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.28■□□□□ 0.2
ATP2B1P20020 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ATP2B1P20020 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ATP2B1P20020 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ATP2B1P20020 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATP2B1P20020 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ATP2B1P20020 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2B1P20020 TSPY25P-201ENST00000429463 745 ntBASIC16.28■□□□□ 0.2
ATP2B1P20020 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2B1P20020 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.28■□□□□ 0.2
ATP2B1P20020 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2B1P20020 MARK2P5-201ENST00000507649 634 ntBASIC16.28■□□□□ 0.2
ATP2B1P20020 AP001258.2-201ENST00000529891 490 ntBASIC16.28■□□□□ 0.2
ATP2B1P20020 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.28■□□□□ 0.2
ATP2B1P20020 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
ATP2B1P20020 GPR182-203ENST00000622922 591 ntBASIC16.28■□□□□ 0.2
ATP2B1P20020 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.28■□□□□ 0.2
ATP2B1P20020 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2B1P20020 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2B1P20020 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP2B1P20020 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATP2B1P20020 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ATP2B1P20020 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC16.28■□□□□ 0.2
ATP2B1P20020 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP2B1P20020 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ATP2B1P20020 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ATP2B1P20020 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ATP2B1P20020 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ATP2B1P20020 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP2B1P20020 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.27■□□□□ 0.2
ATP2B1P20020 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP2B1P20020 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP2B1P20020 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP2B1P20020 AC125604.1-201ENST00000496255 707 ntBASIC16.27■□□□□ 0.2
ATP2B1P20020 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP2B1P20020 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP2B1P20020 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.27■□□□□ 0.2
ATP2B1P20020 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP2B1P20020 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP2B1P20020 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATP2B1P20020 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP2B1P20020 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATP2B1P20020 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP2B1P20020 KRT8P21-201ENST00000430398 1491 ntBASIC16.27■□□□□ 0.19
ATP2B1P20020 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP2B1P20020 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ATP2B1P20020 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ATP2B1P20020 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC16.27■□□□□ 0.19
ATP2B1P20020 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
ATP2B1P20020 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP2B1P20020 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP2B1P20020 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP2B1P20020 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms